RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 STOML3Q8TAV4 291 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 MRGPRDQ8TDS7 321 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 SCARB1Q8WTV0 552 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 RRNAD1Q96FB5 475 aaKnown RBP5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 PHYHIPLQ96FC7 376 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 FAM210AQ96ND0 272 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 GAFA1Q96PS6 74 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 OR2S2Q9NQN1 319 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 CYTL1Q9NRR1 136 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 MED9Q9NWA0 146 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 TAS2R3Q9NYW6 316 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 OR5AC2Q9NZP5 309 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 GSKIPQ9P0R6 139 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 JPT1Q9UK76 154 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 NSG2Q9Y328 171 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 RNF115Q9Y4L5 304 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 PPIAL4AQ9Y536 164 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 AUP1Q9Y679 476 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 ATMQ13315 3056 aa5.87□□□□□ -1.47
HMGN1P6-201ENST00000438508 BSNQ9UPA5 3926 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 NBASA2RRP1 2371 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 SPTBN1Q01082 2364 aaKnown RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 KBTBD11-OT1A0A1B0GTJ5 212 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 RPS10-NUDT3A0A1W2PQS6 291 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ZNF729A6NN14 1252 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 FAM90A27PA6NNH2 459 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ST8SIA3O43173 380 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 PROP1O75360 226 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 PLAUP00749 431 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 TFF1P04155 84 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 CD80P33681 288 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 P2RY1P47900 373 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 AP2S1P53680 142 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 UBA52P62987 128 aaKnown RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 SMCO1Q147U7 214 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 Q3ZCU0 254 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 FAM201AQ5SY85 155 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 TPRX1Q8N7U7 411 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 BOLLQ8N9W6 283 aaKnown RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 DMBX1Q8NFW5 382 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ST8SIA2Q92186 375 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 DCUN1D4Q92564 292 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 NEUROG1Q92886 237 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 NINJ1Q92982 152 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 HSD17B10Q99714 261 aaKnown RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 DCTN5Q9BTE1 182 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 SLC25A32Q9H2D1 315 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 SAP30LQ9HAJ7 183 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 TMEM106BQ9NUM4 274 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 COA4Q9NYJ1 87 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 CLN8Q9UBY8 286 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 RBM7Q9Y580 266 aaKnown RBP5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 POMT1Q9Y6A1 747 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ASPMQ8IZT6 3477 aa5.86□□□□□ -1.47
HMGN1P6-201ENST00000438508 ATRXP46100 2492 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 TRGV10A0A0A0MS01 117 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 hADV38S2A0JD32 116 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 CLDN14O95500 239 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 IGKV1-39P01597 117 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 GAPDHP04406 335 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 IGKV1D-39P04432 117 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 SERPINE2P07093 398 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 P0C879 139 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 RPL12P30050 165 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 NKX2-1P43699 371 aaPredicted RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 PPOXP50336 477 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 RAB7AP51149 207 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 ARHGDIBP52566 201 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 BRWD1-AS2P59051 145 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 KRTAP10-11P60412 298 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 RAB14P61106 215 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 EIF5AP63241 154 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 MRPS11P82912 194 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 CATR1Q13166 79 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 TGIF2LYQ8IUE0 185 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 FAM219AQ8IW50 185 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 OR8H3Q8N146 312 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 ZCCHC24Q8N2G6 241 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 MUC15Q8N387 334 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 PRR18Q8N4B5 295 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 RFESDQ8TAC1 157 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 CD300LFQ8TDQ1 290 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 ITLN2Q8WWU7 325 aaPredicted RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 GPR146Q96CH1 333 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 CCL13Q99616 98 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 PARP12Q9H0J9 701 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 ARV1Q9H2C2 271 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 LIN7CQ9NUP9 197 aaKnown RBP5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 SDHAF2Q9NX18 166 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 GFOD1Q9NXC2 390 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 CALYQ9NYX4 217 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 LPAR3Q9UBY5 353 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 NCOR2Q9Y618 2525 aa5.85□□□□□ -1.47
HMGN1P6-201ENST00000438508 BOD1L1Q8NFC6 3051 aa5.84□□□□□ -1.47
HMGN1P6-201ENST00000438508 IGHV1-69-2A0A0G2JMI3 117 aa5.84□□□□□ -1.47
HMGN1P6-201ENST00000438508 MSGN1A6NI15 193 aa5.84□□□□□ -1.47
HMGN1P6-201ENST00000438508 NKX6-3A6NJ46 265 aa5.84□□□□□ -1.47
HMGN1P6-201ENST00000438508 FAM90A26D6RGX4 464 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms