RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 TMEM68Q96MH6 324 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 C21orf140B9A014 251 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 HIST1H3AP68431 136 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 ICAM4Q14773 271 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 DNM1P46Q6ZS02 220 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 OR4D5Q8NGN0 318 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 CCL13Q99616 98 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 GGACTQ9BVM4 153 aa9.88□□□□□ -0.83
PDLIM5-206ENST00000437932 COLCA2A8K830 154 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 OPRK1P41145 380 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SPNS3Q6ZMD2 512 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 NEIL1Q96FI4 390 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SPRR3Q9UBC9 169 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 FBLN5Q9UBX5 448 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 ACAA1P09110 424 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 OR10A7Q8NGE5 316 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 CLDND2Q8NHS1 167 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SRP19P09132 144 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 TOMM20LQ6UXN7 152 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 LRRC30A6NM36 301 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 APOA2P02652 100 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 RPS2P15880 293 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 PSG5Q15238 335 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 LINC00596Q86U02 117 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 GTF3AQ92664 365 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 COMMD5Q9GZQ3 224 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 WIPI2Q9Y4P8 454 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 LOC102723971A0A1B0GUV8 181 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 CXCL1P09341 107 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SP9P0CG40 484 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 IGHV1-2P23083 117 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 CCL8P80075 99 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 KHDC3LQ587J8 217 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 PRR31Q5SQ13 230 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SLC35E3Q7Z769 313 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 MRGPRGQ86SM5 289 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 TMEM171Q8WVE6 324 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 SLC35E1Q96K37 410 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 GSN-AS1Q9NRJ2 163 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 ZDHHC8Q9ULC8 765 aa9.87□□□□□ -0.83
PDLIM5-206ENST00000437932 CD5P06127 495 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 UCP3P55916 312 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 H1FOOQ8IZA3 346 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 GALNT14Q96FL9 552 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 RAB9BQ9NP90 201 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 COX7A2P2O60397 106 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 RIPPLY2Q5TAB7 128 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 FDCSPQ8NFU4 85 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 ZFP36L1Q07352 338 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 OR13A1Q8NGR1 328 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 DAZAP1Q96EP5 407 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 CHD7Q9P2D1 2997 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 PCDH15Q96QU1 1955 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 CNIH1O95406 144 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 CD1BP29016 333 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 HERPUD1Q15011 391 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 TRIOBPQ9H2D6 2365 aa9.86□□□□□ -0.83
PDLIM5-206ENST00000437932 IGHV3-72A0A0B4J1Y9 119 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 SEC14L6B5MCN3 397 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 C12orf77C9JDV5 145 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 RCC1LQ96I51 464 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 A0A087X0M5 115 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 A0A1B0GX30 115 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 FCN1O00602 326 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 GALR2O43603 387 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 PLAUP00749 431 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 P2RY6Q15077 328 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 FAM214BQ7L5A3 538 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 OR2T10Q8NGZ9 312 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 CA5BP1Q8WTZ4 195 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 PCNX3Q9H6A9 2034 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 TRAV17A0A0B4J275 112 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 CA11O75493 328 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 ORM2P19652 201 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 MRPS11P82912 194 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 OR1L6Q8NGR2 347 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 C22orf15Q8WYQ4 148 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 PARD6AQ9NPB6 346 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 CISD1Q9NZ45 108 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 USP34Q70CQ2 3546 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 ARL14EPLP0DKL9 152 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 CTSSP25774 331 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 SRSF4Q08170 494 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 ZNF324BQ6AW86 544 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 LHFPL4Q7Z7J7 247 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 ITLN1Q8WWA0 313 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 ZNF835Q9Y2P0 537 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 NUP210LQ5VU65 1888 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 TRAV34A0A0B4J273 112 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
PDLIM5-206ENST00000437932 PTBP3O95758 552 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms