RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 HYPMO75409 117 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 NAPSAO96009 420 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SLC35B1P78383 322 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 TGFBR3Q03167 851 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 EIF3IQ13347 325 aaKnown RBP6.39□□□□□ -1.39
CPSF6-202ENST00000435070 UBALD1Q8TB05 177 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 C11orf68Q9H3H3 251 aaKnown RBP6.39□□□□□ -1.39
CPSF6-202ENST00000435070 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 COL4A6Q14031 1691 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 IGHV3-20A0A0C4DH32 117 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 F2RP25116 425 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 LGALS4P56470 323 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 RIPPLY3P57055 190 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 RPL15P61313 204 aaKnown RBP6.39□□□□□ -1.39
CPSF6-202ENST00000435070 LCN12Q6JVE5 192 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 S100A7AQ86SG5 101 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ZADH2Q8N4Q0 377 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF114Q8NC26 417 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SLC46A1Q96NT5 459 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 TM2D1Q9BX74 207 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 YPEL1O60688 119 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 MRPL33O75394 65 aaKnown RBP6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SCRG1O75711 98 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 NDUFB4O95168 129 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SERPINE2P07093 398 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SCTP09683 121 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ARF6P62330 175 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF90Q03938 601 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 GPR146Q96CH1 333 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 YPEL2Q96QA6 119 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 OR1A1Q9P1Q5 309 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 UQCR10Q9UDW1 63 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SIRPB1O00241 398 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 LINC00310P59036 64 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 Q6ZRM9 215 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 HES4Q9HCC6 221 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 TAAR3PQ9P1P4 343 aa6.39□□□□□ -1.39
CPSF6-202ENST00000435070 SLC17A3O00476 420 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 NPPCP23582 126 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 IER3P46695 156 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 EFNA3P52797 238 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 GAB4Q2WGN9 574 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ZC2HC1AQ96GY0 325 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 FCN1O00602 326 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 KLRB1Q12918 225 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ASCL4Q6XD76 172 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF525Q8N782 197 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 CLCF1Q9UBD9 225 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 TEX50A0A1B0GTY4 177 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ALG1L2C9J202 215 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 KITLGP21583 273 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 SRP14P37108 136 aaKnown RBP6.38□□□□□ -1.39
CPSF6-202ENST00000435070 TNFRSF4P43489 277 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 PRAMEF20Q5VT98 475 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 NEIL1Q96FI4 390 aaPredicted RBP6.38□□□□□ -1.39
CPSF6-202ENST00000435070 C11orf94C9JXX5 98 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 C3orf80F5H4A9 247 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 DHRS3O75911 302 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 SRPXP78539 464 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 C1orf185Q5T7R7 199 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 DHRS13Q6UX07 377 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 Q6ZPA2 131 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
CPSF6-202ENST00000435070 TRAPPC2LQ9UL33 140 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 TBL2Q9Y4P3 447 aaKnown RBP6.38□□□□□ -1.39
CPSF6-202ENST00000435070 USF3Q68DE3 2245 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 IGHG1P01857 330 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 PSG1P11464 419 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 SSR4P51571 173 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 NMSQ5H8A3 153 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ACSM6Q6P461 480 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 SSUH2Q9Y2M2 353 aa6.38□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF814B7Z6K7 855 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGLC2P0DOY2 106 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 HLA-BQ31612 363 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RIPPLY2Q5TAB7 128 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 OR5D13Q8NGL4 314 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF331Q9NQX6 463 aaPredicted RBP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 PLSCR2Q9NRY7 297 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SLC35D1Q9NTN3 355 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGKV1-27A0A075B6S5 117 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 ODAMA1E959 279 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 TYMSP04818 313 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 NPY1RP25929 384 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 NPBWR2P48146 333 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 ATP5G3P48201 142 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 COMPP49747 757 aaPredicted RBP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RAC1P63000 192 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 PAFAH1B2P68402 229 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms