RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 RPL30P62888 115 aaKnown RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 DEFB109BQ30KR1 87 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 ADAM5Q6NVV9 412 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 HEPN1Q6WQI6 88 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 ZNF808Q8N4W9 903 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 LRRC29Q8WV35 223 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 SLC39A9Q9NUM3 307 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 UFSP2Q9NUQ7 469 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MED12LQ86YW9 2145 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 ESPL1Q14674 2120 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 hCG_1809904A0A1W2PP81 198 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 A0A1W2PR64 198 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 A0A1W2PRV1 198 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MAP1LC3B2A6NCE7 125 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 C17orf98A8MV24 154 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 AP4M1O00189 453 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MGST3O14880 152 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 TGOLN2O43493 480 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 SOX15O60248 233 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 TNFSF13O75888 250 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 GLIPR1P48060 266 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 NUBP1P53384 320 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 FOXF2Q12947 444 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 ZNF726P1Q15940 193 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 OR8G2PQ6IF36 304 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 LCN15Q6UWW0 184 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 OR13A1Q8NGR1 328 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 STARD4Q96DR4 205 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 C5orf30Q96GV9 206 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 RCC1LQ96I51 464 aaKnown RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 SNX22Q96L94 193 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MAP1LC3BQ9GZQ8 125 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 OPN3Q9H1Y3 402 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 NCOR1P1Q9H4R4 102 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 JPT1Q9UK76 154 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 SLC25A15Q9Y619 301 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 VCANP13611 3396 aa8.71□□□□□ -1.01
CD44-210ENST00000434472 UBE2L5PA0A1B0GUS4 154 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 ZFP92A6NM28 416 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 C17orf112F2Z3M2 114 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 RAMP3O60896 148 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 EIF3GO75821 320 aaKnown RBP eCLIP8.71□□□□□ -1.02
CD44-210ENST00000434472 SMIM6P0DI80 62 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 KIR2DS2P43631 304 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 RAB11AP62491 216 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 GNB2P62879 340 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 RPP30P78346 268 aaKnown RBP8.71□□□□□ -1.02
CD44-210ENST00000434472 SRSF6Q13247 344 aaKnown RBP8.71□□□□□ -1.02
CD44-210ENST00000434472 CD177Q8N6Q3 437 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 VSIRQ9H7M9 311 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 MSL2Q9HCI7 577 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 PARD6AQ9NPB6 346 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 TMEM242Q9NWH2 141 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 FZR1Q9UM11 496 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 PSG11Q9UQ72 335 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 GPR179Q6PRD1 2367 aa8.71□□□□□ -1.02
CD44-210ENST00000434472 CTXND1A0A1B0GTU2 59 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 CEBPZOSA8MTT3 80 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 SRRM5B3KS81 715 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 YPEL1O60688 119 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 HPRT1P00492 218 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 IGHV3-13P01766 116 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 IGHV2-5P01817 119 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 FBP1P09467 338 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 WT1P19544 449 aaPredicted RBP8.7□□□□□ -1.02
CD44-210ENST00000434472 FGF7P21781 194 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 GPR12P47775 334 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 VWC2Q2TAL6 325 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 CR1LQ2VPA4 569 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 Q3ZCU0 254 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 TIMM23BQ5SRD1 257 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 FAM90A2PQ658T7 463 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 ZNF709Q8N972 641 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 OR2Z1Q8NG97 314 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 CA5BP1Q8WTZ4 195 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 LHX4Q969G2 390 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 ACTR3CQ9C0K3 210 aaPredicted RBP8.7□□□□□ -1.02
CD44-210ENST00000434472 ZNF665Q9H7R5 613 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 DKK4Q9UBT3 224 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 KNTC1P50748 2209 aa8.7□□□□□ -1.02
CD44-210ENST00000434472 PCP4L1A6NKN8 68 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 PMS2P5A8MQ11 134 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ITGB1BP1O14713 200 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
CD44-210ENST00000434472 ZNF737O75373 536 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 SSTR5P35346 364 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 PSMB3P49720 205 aa8.69□□□□□ -1.02
CD44-210ENST00000434472 ELLP55199 621 aaPredicted RBP8.69□□□□□ -1.02
CD44-210ENST00000434472 AARDQ4LEZ3 155 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms