RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 KCNIP1Q9NZI2 227 aa14.58□□□□□ -0.08
SEMA3B-204ENST00000433753 CYB5BO43169 146 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 PTBP3O95758 552 aaKnown RBP14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 DEFA4P12838 97 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 NDUFA6P56556 154 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 HBG1P69891 147 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 HBG2P69892 147 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 SLC38A11Q08AI6 406 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 FAM214BQ7L5A3 538 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 TMEM178AQ8NBL3 297 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 FDCSPQ8NFU4 85 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 COQ2Q96H96 371 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 OR5H1A6NKK0 313 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 CEBPZOSA8MTT3 80 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 IGHV2-70P01814 119 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 BCL2P10415 239 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 TNFRSF9Q07011 255 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 FOXF2Q12947 444 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 DPPA3Q6W0C5 159 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 EDARADDQ8WWZ3 215 aa14.57□□□□□ -0.08
SEMA3B-204ENST00000433753 RPP25LQ8N5L8 163 aaKnown RBP14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 ZNF645Q8N7E2 425 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 TRAV1-1A0A0B4J248 108 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 TMEM30CPA0ZSE6 113 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 IGHV3-13P01766 116 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 IGHV3-7P01780 117 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 CA5BP1Q8WTZ4 195 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 TAF15Q92804 592 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 SSX3Q99909 188 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 CLCF1Q9UBD9 225 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 ODAMA1E959 279 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 TOLLIPQ9H0E2 274 aa14.56□□□□□ -0.08
SEMA3B-204ENST00000433753 MAP1LC3B2A6NCE7 125 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 ZG16O60844 167 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 TRGC2P03986 189 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 WNT2P09544 360 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 HOXA5P20719 270 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 MDKP21741 143 aaPredicted RBP14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 Q6ZT83 130 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 C9orf106Q8NAJ2 232 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 MAP1LC3BQ9GZQ8 125 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 IFITM10A6NMD0 228 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 RBMXL2O75526 392 aaKnown RBP14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 KIR2DL2P43627 348 aaPredicted RBP14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 WDR82Q6UXN9 313 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 SPNS3Q6ZMD2 512 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 SLC35E3Q7Z769 313 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 LINC00469Q8N7U9 141 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 WDR31Q8NA23 367 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 OR13A1Q8NGR1 328 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 GATAD1Q8WUU5 269 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 MBD3L1Q8WWY6 194 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 GGACTQ9BVM4 153 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 HES4Q9HCC6 221 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 CISD1Q9NZ45 108 aaKnown RBP14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 DOK5Q9P104 306 aa14.55□□□□□ -0.08
SEMA3B-204ENST00000433753 CEP250Q9BV73 2442 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 A0A087WWC5 75 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 LINC00473A8K010 186 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 ST8SIA5O15466 376 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 TIMM8AO60220 97 aaPredicted RBP14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 WT1P19544 449 aaPredicted RBP14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 COL10A1Q03692 680 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 PDZD11Q5EBL8 140 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 ACSM6Q6P461 480 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 HIPK2Q9H2X6 1198 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 SLC25A22Q9H936 323 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 EDDM3AQ14507 147 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 TMEM41BQ5BJD5 291 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 TMEM14EPQ6UXP3 125 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 ACP7Q6ZNF0 438 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 LHX4Q969G2 390 aa14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 PSMG3Q9BT73 122 aaPredicted RBP14.54□□□□□ -0.08
SEMA3B-204ENST00000433753 TRIP6Q15654 476 aaKnown RBP14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 C4orf17Q53FE4 359 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 GFI1BQ5VTD9 330 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 INO80CQ6PI98 192 aaPredicted RBP14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 NINJ1Q92982 152 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 SLC39A9Q9NUM3 307 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 PSG11Q9UQ72 335 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 CACNA1GO43497 2377 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 LRRC30A6NM36 301 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 ZNF737O75373 536 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 CECR9P0C854 216 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 RD3LP0DJH9 198 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 SERF2P84101 59 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 HSPB7Q9UBY9 170 aa14.53□□□□□ -0.08
SEMA3B-204ENST00000433753 TRBV23-1A0A0A0MS06 115 aa14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 OOEPA6NGQ2 149 aa14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 CDX1P47902 265 aaPredicted RBP14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 TFF3Q07654 80 aa14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 Q3ZCU0 254 aa14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 FIP1L1Q6UN15 594 aaKnown RBP14.52□□□□□ -0.08
SEMA3B-204ENST00000433753 RNF212BA8MTL3 300 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 J3QW42 95 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 HIST1H2BKO60814 126 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 IGKV3-15P01624 115 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 HIST1H2BJP06899 126 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 HIST1H2BOP23527 126 aa14.52□□□□□ -0.09
SEMA3B-204ENST00000433753 HOXC12P31275 282 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms