RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RPL39P5Q59GN2 51 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 C16orf87Q6PH81 154 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 IDO2Q6ZQW0 420 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 CMTM1Q8IZ96 169 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 OR51S1Q8NGJ8 323 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 ZNF418Q8TF45 676 aaPredicted RBP8.9□□□□□ -0.98
CHD4-202ENST00000430771 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.98
CHD4-202ENST00000430771 C22orf15Q8WYQ4 148 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 ST6GALNAC6Q969X2 333 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.98
CHD4-202ENST00000430771 ADTRPQ96IZ2 230 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 AKR1E2Q96JD6 320 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 SCGB3A2Q96PL1 93 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 PALMDQ9NP74 551 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 SDHAF2Q9NX18 166 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 RNF150Q9ULK6 438 aa8.9□□□□□ -0.98
CHD4-202ENST00000430771 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 IGHV1-3A0A0C4DH29 117 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 LINC00854A0A1B0GVQ3 168 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 A0A1W2PPI3 338 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 RNF212BA8MTL3 300 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 VGLL3A8MV65 326 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 M0R1X1 148 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 GPR31O00270 319 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 LYRM1O43325 122 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 APOA2P02652 100 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 REG1BP48304 166 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 THBS3P49746 956 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 RAB13P51153 203 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 DYNLT3P51808 116 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 CATR1Q13166 79 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 CBX3Q13185 183 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 RBMS2Q15434 407 aaKnown RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 ABCA11PQ4W5N1 156 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 LDLRAD2Q5SZI1 272 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 AADACL3Q5VUY0 350 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 ZNF66Q6ZN08 573 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 BCL6BQ8N143 479 aaPredicted RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 DRAM1Q8N682 238 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 CCDC71LQ8N9Z2 235 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 OR5R1Q8NH85 324 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 TERB2Q8NHR7 220 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 ZFAND1Q8TCF1 268 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 JMJD8Q96S16 334 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 HSD17B10Q99714 261 aaKnown RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 MRPL20Q9BYC9 149 aaKnown RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 MEGF9Q9H1U4 602 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 CCL28Q9NRJ3 127 aa8.89□□□□□ -0.99
CHD4-202ENST00000430771 C14orf166Q9Y224 244 aaKnown RBP8.89□□□□□ -0.99
CHD4-202ENST00000430771 MDFIC2A0A1B0GVS7 189 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 TIMM23O14925 209 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 TAGLNQ01995 201 aaKnown RBP8.88□□□□□ -0.99
CHD4-202ENST00000430771 ASAH1Q13510 395 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 DIAPH2-AS1Q14236 149 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 ZNF818PQ6ZRF7 136 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 KCTD9Q7L273 389 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 MOB3BQ86TA1 216 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 DYNAPQ8N1N2 210 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 TMEM86BQ8N661 226 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 SIGLECL1Q8N7X8 197 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 BVESQ8NE79 360 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 OR13C8Q8NGS7 320 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 SSMEM1Q8WWF3 244 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 AJUBAQ96IF1 538 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 SLC25A21Q9BQT8 299 aaPredicted RBP8.88□□□□□ -0.99
CHD4-202ENST00000430771 ZNF251Q9BRH9 671 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 RSRP1Q9BUV0 290 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 DPAGT1Q9H3H5 408 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 PRDM13Q9H4Q3 707 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 OCEL1Q9H607 264 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 LIN7CQ9NUP9 197 aaKnown RBP8.88□□□□□ -0.99
CHD4-202ENST00000430771 POMT1Q9Y6A1 747 aa8.88□□□□□ -0.99
CHD4-202ENST00000430771 CTSDP07339 412 aaPredicted RBP8.87□□□□□ -0.99
CHD4-202ENST00000430771 RRASP10301 218 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
CHD4-202ENST00000430771 KIR2DS2P43631 304 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 BAMBIQ13145 260 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 HABP2Q14520 560 aaPredicted RBP8.87□□□□□ -0.99
CHD4-202ENST00000430771 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 Q6YL49 198 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 PDPNQ86YL7 162 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 ZDHHC22Q8N966 263 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 POC5Q8NA72 575 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 ENKURQ8TC29 256 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 MARCH1Q8TCQ1 289 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 TCTEX1D2Q8WW35 142 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 CFHR4Q92496 578 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 C5orf30Q96GV9 206 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 ZNF48Q96MX3 618 aaPredicted RBP8.87□□□□□ -0.99
CHD4-202ENST00000430771 SSX3Q99909 188 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 SLC2A9Q9NRM0 540 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 COPZ2Q9P299 210 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 PITPNC1Q9UKF7 332 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 TBC1D24Q9ULP9 559 aa8.87□□□□□ -0.99
CHD4-202ENST00000430771 PRELID3BQ9Y3B1 194 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms