RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GPR12P47775 334 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 ACTBP60709 375 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 FOXE3Q13461 319 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 GNMTQ14749 295 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 C5orf64Q2M2E5 130 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 CADM3Q8N126 398 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 STPG2Q8N412 459 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 OR10V1Q8NGI7 309 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 OR13F1Q8NGS4 319 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 MYOZ3Q8TDC0 251 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 IL1F10Q8WWZ1 152 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMC1A-203ENST00000428014 BORCS5Q969J3 196 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 SLC25A46Q96AG3 418 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 ATG5Q9H1Y0 275 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 KCNK15Q9H427 330 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 RDH8Q9NYR8 311 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 SIGLEC9Q9Y336 463 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 WASHC3Q9Y3C0 194 aa7.22□□□□□ -1.25
SMC1A-203ENST00000428014 PLXNB1O43157 2135 aa7.21□□□□□ -1.25
SMC1A-203ENST00000428014 A0A1W2PPE3 182 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ARPC1BO15143 372 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 XRCC3O43542 346 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 PROP1O75360 226 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 TUSC2O75896 110 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 IGHV3-7P01780 117 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 TFAP2AP05549 437 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CT45A6P0DMU7 189 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CT45A5P0DMU8 189 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CT45A7P0DMV0 189 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 GNB3P16520 340 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CD24P25063 80 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 RPL5P46777 297 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CDX1P47902 265 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 LUMP51884 338 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 RUNX1Q01196 453 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CFHR3Q02985 330 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ARFRP1Q13795 201 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 MMDQ15546 238 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 MOGAT2Q3SYC2 334 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 CDNFQ49AH0 187 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 PYHIN1Q6K0P9 492 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF562Q6V9R5 426 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 Q6ZS46 218 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 REC114Q7Z4M0 266 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ANKRD13BQ86YJ7 626 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 H1FOOQ8IZA3 346 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ZBTB34Q8NCN2 500 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 LGALS14Q8TCE9 139 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 C15orf40Q8WUR7 153 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 SLC25A38Q96DW6 304 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 S100A16Q96FQ6 103 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 TSNAXQ99598 290 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 MRPL20Q9BYC9 149 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 KIAA1456Q9P272 454 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 ZMAT5Q9UDW3 170 aaKnown RBP7.21□□□□□ -1.26
SMC1A-203ENST00000428014 MEGF8Q7Z7M0 2845 aa7.21□□□□□ -1.26
SMC1A-203ENST00000428014 NCBP2LA6PVI3 153 aaKnown RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 H3BUA1 57 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 RRHO14718 337 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 GABARAPO95166 117 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 HLA-DQB1P01920 261 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 APOA1P02647 267 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 APOA2P02652 100 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 CD28P10747 220 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 SLC2A2P11168 524 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 REG1BP48304 166 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 ALDH3B2P48448 385 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 THBS3P49746 956 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 GNG2P59768 71 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 SRSF4Q08170 494 aaKnown RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 AKIRIN2Q53H80 203 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 FBLN7Q53RD9 439 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 TMEM177Q53S58 311 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 TCTEX1D4Q5JR98 221 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 UBE2NLQ5JXB2 153 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 LIN54Q6MZP7 749 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 OVCH2Q7RTZ1 564 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 MINDY2Q8NBR6 621 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 OSR1Q8TAX0 266 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 CITED2Q99967 270 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 HDHD3Q9BSH5 251 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 RABL2AQ9UBK7 228 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-203ENST00000428014 ANXA10Q9UJ72 324 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 ADAM30Q9UKF2 790 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 RNF150Q9ULK6 438 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 ANAPC10Q9UM13 185 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 RABL2BQ9UNT1 228 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 OR2W1Q9Y3N9 320 aa7.2□□□□□ -1.26
SMC1A-203ENST00000428014 LOC100506127A0A0U1RQW1 187 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 SULT1C2O00338 296 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 CREBL2O60519 120 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-203ENST00000428014 TSPAN15O95858 294 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 GSTT2P0CG29 244 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 GSTT2BP0CG30 244 aa7.19□□□□□ -1.26
SMC1A-203ENST00000428014 NAT1P18440 290 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms