RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 IGKV1D-17A0A075B6S4 117 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 A0A1W2PPE3 182 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 IFNA5P01569 189 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 SULT1A1P50225 295 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 RAB5BP61020 215 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 ZNF645Q8N7E2 425 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 VSIRQ9H7M9 311 aa9.67□□□□□ -0.86
UBR4-207ENST00000425413 S100A6P06703 90 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 CD55P08174 381 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 HOXA1P49639 335 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 UTF1Q5T230 341 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 SLC35E4Q6ICL7 350 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 DUX4L9Q6RFH8 374 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 Q6ZS92 163 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 CISD2Q8N5K1 135 aaKnown RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 ITLN1Q8WWA0 313 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 hCG_1809904A0A1W2PP81 198 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 A0A1W2PR64 198 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 A0A1W2PRV1 198 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 LINC00473A8K010 186 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 C1orf196B1AJZ1 125 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 LMO1P25800 156 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 RAB5CP51148 216 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 C1orf185Q5T7R7 199 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 HAPLN4Q86UW8 402 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 TGIF2LYQ8IUE0 185 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 ZCCHC24Q8N2G6 241 aaKnown RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 FAM24BQ8N5W8 94 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 RAB40CQ96S21 281 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 A0A1W2PPE2 198 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 FGF8P55075 233 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 KLF3P57682 345 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 BRWD1-AS2P59051 145 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 BAXQ07812 192 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 HABP2Q14520 560 aaPredicted RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 MBNL2Q5VZF2 373 aaKnown RBP9.66□□□□□ -0.86
UBR4-207ENST00000425413 ADAM5Q6NVV9 412 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 GCSAMQ8N6F7 178 aa9.66□□□□□ -0.86
UBR4-207ENST00000425413 UBE2L5PA0A1B0GUS4 154 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 HMGB3O15347 200 aaKnown RBP9.65□□□□□ -0.86
UBR4-207ENST00000425413 UBE2KP61086 200 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 SPSB3Q6PJ21 355 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 VKORC1L1Q8N0U8 176 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 SCGB1C1Q8TD33 95 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.86
UBR4-207ENST00000425413 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 PBDC1Q9BVG4 233 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 RBKSQ9H477 322 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 WASF3Q9UPY6 502 aa9.65□□□□□ -0.86
UBR4-207ENST00000425413 SPINT2O43291 252 aa9.65□□□□□ -0.87
UBR4-207ENST00000425413 PTAFRP25105 342 aa9.65□□□□□ -0.87
UBR4-207ENST00000425413 OR2B8PP59922 312 aa9.65□□□□□ -0.87
UBR4-207ENST00000425413 GNPNAT1Q96EK6 184 aaPredicted RBP9.65□□□□□ -0.87
UBR4-207ENST00000425413 DCAF16Q9NXF7 216 aa9.65□□□□□ -0.87
UBR4-207ENST00000425413 ODAMA1E959 279 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 EIF2S3P41091 472 aaKnown RBP9.64□□□□□ -0.87
UBR4-207ENST00000425413 TAS2R30P59541 319 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 C15orf54Q8N8G6 183 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 OR4C12Q96R67 309 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 MRPL37Q9BZE1 423 aaKnown RBP9.64□□□□□ -0.87
UBR4-207ENST00000425413 SLC35B3Q9H1N7 401 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 ATRXP46100 2492 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 RNF212BA8MTL3 300 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 CYB5R3P00387 301 aaPredicted RBP9.64□□□□□ -0.87
UBR4-207ENST00000425413 FOXC1Q12948 553 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 RTP5Q14D33 572 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 TIMM23BQ5SRD1 257 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 IGFL3Q6UXB1 125 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 MEGF10Q96KG7 1140 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 RPRMQ9NS64 109 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 MMP24Q9Y5R2 645 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 BSNQ9UPA5 3926 aa9.64□□□□□ -0.87
UBR4-207ENST00000425413 ZFP92A6NM28 416 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 ZG16O60844 167 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 FCGR3BO75015 233 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 ZNF737O75373 536 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 DFFBO76075 338 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 MMP9P14780 707 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 TNFRSF9Q07011 255 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 CATR1Q13166 79 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 IGF2-ASQ6U949 168 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 WFDC8Q8IUA0 241 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 ZNF525Q8N782 197 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 TP53TG5Q9Y2B4 290 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 KLF2Q9Y5W3 355 aaPredicted RBP9.63□□□□□ -0.87
UBR4-207ENST00000425413 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 SRRM5B3KS81 715 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 GPR12P47775 334 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 RBMS3Q6XE24 437 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms