RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 LYNX1P0DP58 116 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 HFEQ30201 348 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 IL22RA2Q969J5 263 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
CALD1-206ENST00000424922 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
CALD1-206ENST00000424922 CRYBG3Q68DQ2 2970 aa12.48□□□□□ -0.41
CALD1-206ENST00000424922 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 A1L4Q6 167 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 TMEM218A2RU14 115 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 CLEC18AA5D8T8 446 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 ZNF729A6NN14 1252 aaPredicted RBP12.47□□□□□ -0.41
CALD1-206ENST00000424922 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 APOC3P02656 99 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 FBP1P09467 338 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 COL8A2P25067 703 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 UCP1P25874 307 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 ZNF818PQ6ZRF7 136 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 GAPTQ8N292 157 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 CLEC18CQ8NCF0 446 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 COQ2Q96H96 371 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 SNX22Q96L94 193 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 CCL13Q99616 98 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 MLXQ9UH92 298 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
CALD1-206ENST00000424922 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 TMEM30CPA0ZSE6 113 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 LY6HO94772 140 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 CLDN1O95832 211 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 IGHV2-70P01814 119 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 KRBOX4Q5JUW0 171 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 DUX4L9Q6RFH8 374 aaPredicted RBP12.47□□□□□ -0.41
CALD1-206ENST00000424922 CMTM1Q8IZ96 169 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 SELENOHQ8IZQ5 122 aaKnown RBP12.47□□□□□ -0.41
CALD1-206ENST00000424922 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 TPRX1Q8N7U7 411 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 C11orf1Q9H5F2 150 aa12.47□□□□□ -0.41
CALD1-206ENST00000424922 BORCS7-ASMTA0A0B4J1R7 106 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 H0Y980 276 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 K7N7A8 449 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 S100GP29377 79 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 GLIPR1P48060 266 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 COTL1Q14019 142 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 H1FOOQ8IZA3 346 aaPredicted RBP12.46□□□□□ -0.41
CALD1-206ENST00000424922 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 SDSLQ96GA7 329 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 GAFA1Q96PS6 74 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 MS4A7Q9GZW8 240 aaPredicted RBP12.46□□□□□ -0.41
CALD1-206ENST00000424922 ZNF665Q9H7R5 613 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 PARP11Q9NR21 331 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 OR2W1Q9Y3N9 320 aa12.46□□□□□ -0.41
CALD1-206ENST00000424922 USP9YO00507 2555 aaPredicted RBP12.46□□□□□ -0.41
CALD1-206ENST00000424922 GOSR1O95249 250 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 PLA2G2AP14555 144 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 CDKN1AP38936 164 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 GNMTQ14749 295 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 ZNF788Q6ZQV5 615 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 OR5D13Q8NGL4 314 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 PPP1R35Q8TAP8 253 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 KIRREL1Q96J84 757 aa12.46□□□□□ -0.42
CALD1-206ENST00000424922 RCL1Q9Y2P8 373 aaKnown RBP12.46□□□□□ -0.42
CALD1-206ENST00000424922 TENM4Q6N022 2769 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 DNASE2O00115 360 aaPredicted RBP12.45□□□□□ -0.42
CALD1-206ENST00000424922 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 ATG12O94817 140 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 SEC11BP0C7V7 166 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 PRR18Q8N4B5 295 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 FAM216BQ8N7L0 139 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 OR10J5Q8NHC4 309 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 TCEAL7Q9BRU2 100 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 MBNL3Q9NUK0 354 aaKnown RBP12.45□□□□□ -0.42
CALD1-206ENST00000424922 SPG11Q96JI7 2443 aa12.45□□□□□ -0.42
CALD1-206ENST00000424922 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
CALD1-206ENST00000424922 MGST3O14880 152 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 MMP9P14780 707 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
CALD1-206ENST00000424922 BTNL8Q6UX41 500 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 NEU4Q8WWR8 484 aaPredicted RBP12.44□□□□□ -0.42
CALD1-206ENST00000424922 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
CALD1-206ENST00000424922 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 TACC2O95359 2948 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 CENPEQ02224 2701 aa12.44□□□□□ -0.42
CALD1-206ENST00000424922 NKX6-3A6NJ46 265 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms