RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PRDM2Q13029 1718 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 OVOS2A0A0J9YW53 1432 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 OVOS2Q6IE36 1432 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 KIF1BO60333 1816 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ABCC12Q96J65 1359 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RPL37AP8A6NKH3 93 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF705GA8MUZ8 300 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 H3BSA7 217 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 M0R1X1 148 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PIRO00625 290 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ISLRO14498 428 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RGS5O15539 181 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 COX7A2P2O60397 106 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 GGCTO75223 188 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 CDS2O95674 445 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 GYPCP04921 128 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 CD48P09326 243 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF806P0C7X5 589 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 CHTF8P0CG12 524 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PSG2P11465 335 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PGAM2P15259 253 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 EVI2AP22794 236 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 NPY1RP25929 384 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PSMB3P49720 205 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RPL23P62829 140 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 CRADDP78560 199 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PSG9Q00887 426 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 LOXL1Q08397 574 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 BTN1A1Q13410 526 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RUNX3Q13761 415 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RHEBQ15382 184 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 SSX1Q16384 188 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 TAF9Q16594 264 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF239Q16600 458 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ORMDL2Q53FV1 153 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 NHLRC3Q5JS37 347 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 CASC10Q5T4H9 136 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF613Q6PF04 617 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 ACP7Q6ZNF0 438 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 SHISA6Q6ZSJ9 500 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RFLNAQ6ZTI6 216 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 MOB1BQ7L9L4 216 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PDZD9Q8IXQ8 264 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RPUSD4Q96CM3 377 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 FXYD5Q96DB9 178 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 NARS2Q96I59 477 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM101Q96IK0 257 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PPP3R2Q96LZ3 170 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 SYT15Q9BQS2 421 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 PTGES2Q9H7Z7 377 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 DHCR7Q9UBM7 475 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 RPS6KB2Q9UBS0 482 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 LAMTOR2Q9Y2Q5 125 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 F11RQ9Y624 299 aaKnown RBP2.77□□□□□ -1.97
SF3B1-205ENST00000424674 U3KQ87 197 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 KDM5BQ9UGL1 1544 aa2.77□□□□□ -1.97
SF3B1-205ENST00000424674 BCL9O00512 1426 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 CD109Q6YHK3 1445 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 SSH2Q76I76 1423 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TRBV19A0A075B6N1 114 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 IGKV1-27A0A075B6S5 117 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 MEIKINA0A087WXM9 373 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TMED7-TICAM2A0A0A6YYA0 188 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 IGHV1-69-2A0A0G2JMI3 117 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 A0A0X1KG70 313 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM269A0A1B0GVZ9 245 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 DNASE2O00115 360 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 LGALS9O00182 355 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF354AO60765 605 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 GAS8-AS1O95177 125 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 APOMO95445 188 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF682O95780 498 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 HLA-DPB1P04440 258 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 CSN2P05814 226 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 SOD3P08294 240 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TDGF1P13385 188 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF30P17039 623 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 GATA2P23769 480 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 GABRA3P34903 492 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 INPP1P49441 399 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 LHX2P50458 406 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TDGF1P3P51864 188 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 POLR2HP52434 150 aaKnown RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 RAP1AP62834 184 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 GNA12Q03113 381 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 BIKQ13323 160 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 GUCA2BQ16661 112 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 DNLZQ5SXM8 178 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 IL34Q6ZMJ4 242 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 FAM19A3Q7Z5A8 133 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 HSD17B13Q7Z5P4 300 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 LINC00596Q86U02 117 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 SGPP2Q8IWX5 399 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 DRAM1Q8N682 238 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 OR2T27Q8NH04 317 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 SLC7A6Q92536 515 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 PTX4Q96A99 478 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms