RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FAM120AOSQ5T036 256 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 TPTE2P1Q5T6R2 138 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 TEX29Q8N6K0 151 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 BVESQ8NE79 360 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 C17orf50Q8WW18 174 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 MALSU1Q96EH3 234 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 S1PR3Q99500 378 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 GSX1Q9H4S2 264 aaPredicted RBP10.11□□□□□ -0.79
TMEM53-206ENST00000420706 TMEM160Q9NX00 188 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 COPZ2Q9P299 210 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 NUP50Q9UKX7 468 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 FLVCR2Q9UPI3 526 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 OTOGQ6ZRI0 2925 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 ARPC1BO15143 372 aaKnown RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 PTTG1O95997 202 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 GAPDHP04406 335 aaKnown RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CT45A6P0DMU7 189 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CT45A5P0DMU8 189 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CT45A7P0DMV0 189 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 EPHA1P21709 976 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 SAA4P35542 130 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CEACAM3P40198 252 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 RND3P61587 244 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 RGS21Q2M5E4 152 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 PHLDA2Q53GA4 152 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 CLEC9AQ6UXN8 241 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 DYNAPQ8N1N2 210 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 ADAD2Q8NCV1 583 aaKnown RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 RPEQ96AT9 228 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 GPHA2Q96T91 129 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 C14orf166Q9Y224 244 aaKnown RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 NUBP2Q9Y5Y2 271 aa10.1□□□□□ -0.79
TMEM53-206ENST00000420706 SOX21Q9Y651 276 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-206ENST00000420706 TRAV6A0A075B6T7 132 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 OOSP1A8MZH6 123 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 M0R1X1 148 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 TNFSF12O43508 249 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 RLN1P04808 185 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
TMEM53-206ENST00000420706 REG1BP48304 166 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 PIGPP57054 158 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 LINC00205P59089 165 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 RPL30P62888 115 aaKnown RBP10.09□□□□□ -0.79
TMEM53-206ENST00000420706 DHODHQ02127 395 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 OXA1LQ15070 435 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 SSX2Q16385 188 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 ABCA11PQ4W5N1 156 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 PLET1Q6UQ28 207 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF66Q6ZN08 573 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 IL17RELQ6ZVW7 336 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 TGIF2LXQ8IUE1 241 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 DRAXINQ8NBI3 349 aaPredicted RBP10.09□□□□□ -0.79
TMEM53-206ENST00000420706 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
TMEM53-206ENST00000420706 TMEM230Q96A57 120 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 NABP2Q9BQ15 211 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 MS4A7Q9GZW8 240 aaPredicted RBP10.09□□□□□ -0.79
TMEM53-206ENST00000420706 C20orf85Q9H1P6 137 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 SLC2A9Q9NRM0 540 aa10.09□□□□□ -0.79
TMEM53-206ENST00000420706 IGHV1-3A0A0C4DH29 117 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 LINC00473A8K010 186 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 MPPED1O15442 326 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 PAX6P26367 422 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 GLDNQ6ZMI3 551 aaPredicted RBP10.08□□□□□ -0.8
TMEM53-206ENST00000420706 C9orf139Q6ZV77 190 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 TMED4Q7Z7H5 227 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 TBC1D26Q86UD7 250 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 SLC25A42Q86VD7 318 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 BCL6BQ8N143 479 aaPredicted RBP10.08□□□□□ -0.8
TMEM53-206ENST00000420706 CENPSQ8N2Z9 138 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 CCDC71LQ8N9Z2 235 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 ZNF383Q8NA42 475 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 HSD17B10Q99714 261 aaKnown RBP10.08□□□□□ -0.8
TMEM53-206ENST00000420706 MARVELD1Q9BSK0 173 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 MRPL20Q9BYC9 149 aaKnown RBP10.08□□□□□ -0.8
TMEM53-206ENST00000420706 ALX4Q9H161 411 aaPredicted RBP10.08□□□□□ -0.8
TMEM53-206ENST00000420706 MEGF9Q9H1U4 602 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 NUDT15Q9NV35 164 aa10.08□□□□□ -0.8
TMEM53-206ENST00000420706 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 A0A1W2PPI3 338 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 INMT-MINDY4F8WBC2 141 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 TXNL1O43396 289 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 AKR1C4P17516 323 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 ANXA7P20073 488 aaKnown RBP10.07□□□□□ -0.8
TMEM53-206ENST00000420706 S100GP29377 79 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 THBS3P49746 956 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 MECP2P51608 486 aaKnown RBP10.07□□□□□ -0.8
TMEM53-206ENST00000420706 CCDC144NLQ6NUI1 221 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
TMEM53-206ENST00000420706 MOB3BQ86TA1 216 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 OR8H3Q8N146 312 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms