RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 WSB1Q9Y6I7 421 aa7.5□□□□□ -1.21
LINCMD1-201ENST00000418518 ABCA4P78363 2273 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TRGV10A0A0A0MS01 117 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 IGHV3-43A0A0B4J1X8 118 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 FAM24AA6NFZ4 105 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 LINC00473A8K010 186 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 CCL21O00585 134 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 RAB29O14966 203 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 ST8SIA5O15466 376 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 SIAH2O43255 324 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TXNL1O43396 289 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 CHST1O43916 411 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 PROP1O75360 226 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 CLDN1O95832 211 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 IGHV3-43DP0DP04 118 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 EPHA1P21709 976 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 APOBEC3AP31941 199 aaPredicted RBP7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 DUTP33316 252 aaKnown RBP7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 KIR2DS2P43631 304 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 ID4P47928 161 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 VAMP2P63027 116 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 CCL8P80075 99 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 NHLH2Q02577 135 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 MEF2CQ06413 473 aaPredicted RBP7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF266Q14584 549 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 Q3ZCU0 254 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 DUX4L9Q6RFH8 374 aaPredicted RBP7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 IL34Q6ZMJ4 242 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TGIF2LYQ8IUE0 185 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 SPAG16Q8N0X2 631 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 FGFRL1Q8N441 504 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 OR1S2Q8NGQ3 325 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 RFESDQ8TAC1 157 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TCTEX1D2Q8WW35 142 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 MARC2Q969Z3 335 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 LRRC46Q96FV0 321 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TSNAXQ99598 290 aaKnown RBP7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 MS4A5Q9H3V2 200 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 PARP11Q9NR21 331 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 MMP26Q9NRE1 261 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TAS2R3Q9NYW6 316 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 COQ3Q9NZJ6 369 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 GNG12Q9UBI6 72 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 KAAG1Q9UBP8 84 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 HSPB7Q9UBY9 170 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 NDRG3Q9UGV2 375 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 RNF150Q9ULK6 438 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 PSG11Q9UQ72 335 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 LINC00312Q9Y6C7 94 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 COL6A6A6NMZ7 2263 aa7.49□□□□□ -1.21
LINCMD1-201ENST00000418518 TMEM8BA6NDV4 472 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 FAM90A27PA6NNH2 459 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 WRBO00258 174 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 DLL1O00548 723 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 SYNGR2O43760 224 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 RAMP3O60896 148 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 S1PR2O95136 353 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 GYPAP02724 150 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 DANCRP0C864 163 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 GPR12P47775 334 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 RAB5CP51148 216 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 EDDM3BP56851 147 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 RPL23AP62750 156 aaKnown RBP7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 TFF3Q07654 80 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 BTNL8Q6UX41 500 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 FAM216BQ8N7L0 139 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 RNASE11Q8TAA1 199 aaKnown RBP7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 DDB2Q92466 427 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 LINC00052Q96N35 136 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 CCL13Q99616 98 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 ABHD14AQ9BUJ0 271 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 SMIM3Q9BZL3 60 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 MAGT1Q9H0U3 335 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 TMEM106BQ9NUM4 274 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 IDI2-AS1Q9NZ38 188 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 RPUSD1Q9UJJ7 312 aaKnown RBP7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 NUP50Q9UKX7 468 aa7.48□□□□□ -1.21
LINCMD1-201ENST00000418518 PPIAL4EA0A075B759 164 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 hADV38S2A0JD32 116 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 DEFB108AA8MXU0 73 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PPIAL4DF5H284 164 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 TRIM77I1YAP6 450 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZG16O60844 167 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 MED6O75586 246 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 FCN3O75636 299 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PPIAL4FP0DN26 164 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF16P17020 682 aaPredicted RBP7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 SULT1A1P50225 295 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PPOXP50336 477 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 CAV2P51636 162 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF134P52741 427 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PJVKQ0ZLH3 352 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 IZUMO4Q1ZYL8 232 aa7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF672Q499Z4 452 aaPredicted RBP7.47□□□□□ -1.21
LINCMD1-201ENST00000418518 PXDC1Q5TGL8 231 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms