RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 SORL1Q92673 2214 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 TRBV6-6A0A0A6YYG2 114 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 LINC01619G3V211 115 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 SLC17A2O00624 439 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 ITGB1BP1O14713 200 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 SOX15O60248 233 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 RBBP9O75884 186 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 ARL6IP5O75915 188 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 SCTP09683 121 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 CD37P11049 281 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 CPEP16870 476 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 CD40LGP29965 261 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 SLURP1P55000 103 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 RPS16P62249 146 aaKnown RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 RPS25P62851 125 aaKnown RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 TRAM1Q15629 374 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 TMEM91Q6ZNR0 172 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 TCTEX1D1Q8N7M0 179 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 OR5AN1Q8NGI8 311 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 ARHGAP5-AS1Q96IT6 56 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 RNF5Q99942 180 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 CMSS1Q9BQ75 279 aaKnown RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 AGMATQ9BSE5 352 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 FAM103A1Q9BTL3 118 aaKnown RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 CCDC90BQ9GZT6 254 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 TOLLIPQ9H0E2 274 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 Q9N2K0 584 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 ISYNA1Q9NPH2 558 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 METTL1Q9UBP6 276 aaKnown RBP10.95□□□□□ -0.66
LINC01006-202ENST00000418309 HSF4Q9ULV5 492 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 NUBP2Q9Y5Y2 271 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
LINC01006-202ENST00000418309 IGHV3-11P01762 117 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 CRIP2P52943 208 aaPredicted RBP10.94□□□□□ -0.66
LINC01006-202ENST00000418309 CLDN12P56749 244 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 IRF3Q14653 427 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 PSG5Q15238 335 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 PYHIN1Q6K0P9 492 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 LFNGQ8NES3 379 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 TSNAXQ99598 290 aaKnown RBP10.94□□□□□ -0.66
LINC01006-202ENST00000418309 GFI1Q99684 422 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 PECRQ9BY49 303 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 C12orf4Q9NQ89 552 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 NKX1-2Q9UD57 310 aaPredicted RBP10.94□□□□□ -0.66
LINC01006-202ENST00000418309 GAB2Q9UQC2 676 aa10.94□□□□□ -0.66
LINC01006-202ENST00000418309 NBEAL2Q6ZNJ1 2754 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 IGHV4OR15-8A0A075B7B6 117 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 A0A087WW49 117 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 RGS10O43665 173 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 CA2P00918 260 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 APOA2P02652 100 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 LGALS1P09382 135 aaKnown RBP10.93□□□□□ -0.66
LINC01006-202ENST00000418309 EGR2P11161 476 aaPredicted RBP10.93□□□□□ -0.66
LINC01006-202ENST00000418309 CALRP27797 417 aaKnown RBP10.93□□□□□ -0.66
LINC01006-202ENST00000418309 RANBP1P43487 201 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 AQP4P55087 323 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 TMEM50BP56557 158 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 LINC00205P59089 165 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 TPPP2P59282 170 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 MRPS15P82914 257 aaKnown RBP10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PRR20EP86478 221 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PRR20CP86479 221 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PRR20DP86480 221 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PRR20BP86481 221 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PRR20AP86496 221 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 TPBGQ13641 420 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 AKIRIN2Q53H80 203 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 CD200R1LQ6Q8B3 271 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 OR56B1Q8NGI3 324 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 PTX4Q96A99 478 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 FLYWCH2Q96CP2 140 aaKnown RBP10.93□□□□□ -0.66
LINC01006-202ENST00000418309 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
LINC01006-202ENST00000418309 TRDCB7Z8K6 153 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 DENRO43583 198 aaKnown RBP10.92□□□□□ -0.66
LINC01006-202ENST00000418309 IGKV1-16P04430 117 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 HSPB1P04792 205 aaKnown RBP10.92□□□□□ -0.66
LINC01006-202ENST00000418309 TFAP2AP05549 437 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 PSMA1P25786 263 aaKnown RBP10.92□□□□□ -0.66
LINC01006-202ENST00000418309 MLLT11Q13015 90 aaPredicted RBP10.92□□□□□ -0.66
LINC01006-202ENST00000418309 ZNF383Q8NA42 475 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 ARPC1AQ92747 370 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 DUSP21Q9H596 190 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 RDH8Q9NYR8 311 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 V9GY05 133 aa10.92□□□□□ -0.66
LINC01006-202ENST00000418309 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
LINC01006-202ENST00000418309 M0R1X1 148 aa10.91□□□□□ -0.66
LINC01006-202ENST00000418309 SLC25A17O43808 307 aa10.91□□□□□ -0.66
LINC01006-202ENST00000418309 PROP1O75360 226 aa10.91□□□□□ -0.66
LINC01006-202ENST00000418309 CNIH1O95406 144 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms