RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DCTN2Q13561 401 aaKnown RBP14.2□□□□□ -0.14
VCP-202ENST00000417448 PNLIPRP3Q17RR3 467 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 RPL39P5Q59GN2 51 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 C8orf31Q8N9H6 132 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 OR2AK2Q8NG84 335 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 DPF1Q92782 380 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 STARD9Q9P2P6 4700 aa14.2□□□□□ -0.14
VCP-202ENST00000417448 FAM25AB3EWG3 89 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 FAM25CB3EWG5 89 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 FAM25GB3EWG6 89 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 CTDSP2O14595 271 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 RGS11O94810 467 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 ZBTB25P24278 435 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 BRS3P32247 399 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 MNDAP41218 407 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 DYNLT3P51808 116 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 TMEM30BQ3MIR4 351 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 TMEM69Q5SWH9 247 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 STEAP3Q658P3 488 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 C10orf99Q6UWK7 81 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 ETV3LQ6ZN32 361 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 OR4A4PQ8NGN8 299 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 DYNC2LI1Q8TCX1 351 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 RTN4IP1Q8WWV3 396 aaPredicted RBP14.19□□□□□ -0.14
VCP-202ENST00000417448 IFI27L2Q9H2X8 130 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 RDH8Q9NYR8 311 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 MGAT4AQ9UM21 535 aa14.19□□□□□ -0.14
VCP-202ENST00000417448 NOL3O60936 208 aaKnown RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 TMEM127O75204 238 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 DTYMKP23919 212 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 IL3RAP26951 378 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 LINC00205P59089 165 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 ZNF816Q0VGE8 651 aaPredicted RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 HES1Q14469 280 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 ARL6IP1Q15041 203 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 Q3ZCU0 254 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 RNASE12Q5GAN4 147 aaKnown RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 MRPL41Q8IXM3 137 aaKnown RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 MRPL20Q9BYC9 149 aaKnown RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 MIXL1Q9H2W2 232 aa14.18□□□□□ -0.14
VCP-202ENST00000417448 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
VCP-202ENST00000417448 SAA2-SAA4A0A096LPE2 208 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 TRBV6-7A0A0A0MS04 114 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 A0A0A6YYH2 397 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 A6NJ64 397 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 OOSP1A8MZH6 123 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 IGKV1D-33P01593 117 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 IGKV1-33P01594 117 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 HLA-DQB1P01920 261 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 APOA1P02647 267 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 SAA2P0DJI9 122 aaPredicted RBP14.17□□□□□ -0.14
VCP-202ENST00000417448 RAB7AP51149 207 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 KIR2DS1Q14954 304 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 CCDC144NLQ6NUI1 221 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 MZT2AQ6P582 158 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 GLDNQ6ZMI3 551 aaPredicted RBP14.17□□□□□ -0.14
VCP-202ENST00000417448 TGIF2LXQ8IUE1 241 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 SNX29P2Q8IUI4 249 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 OR10J5Q8NHC4 309 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 ACOT12Q8WYK0 555 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 ASCL2Q99929 193 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 CABLES2Q9BTV7 478 aa14.17□□□□□ -0.14
VCP-202ENST00000417448 HYDINQ4G0P3 5121 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 OR8U9P0C7N5 309 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 NFYAP23511 347 aaPredicted RBP14.16□□□□□ -0.14
VCP-202ENST00000417448 PITPNAQ00169 270 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 OR8U1Q8NH10 309 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 GINS4Q9BRT9 223 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 AGMATQ9BSE5 352 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 SLC25A33Q9BSK2 321 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 GPR61Q9BZJ8 451 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
VCP-202ENST00000417448 PITPNC1Q9UKF7 332 aa14.16□□□□□ -0.14
VCP-202ENST00000417448 RGS5O15539 181 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 PROP1O75360 226 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 TMEM11P17152 192 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 SOX6P35712 828 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 ARHGDIBP52566 201 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 ZNF137PP52743 207 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 LY6G6FQ5SQ64 297 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 Q6ZS49 121 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 CENPVQ7Z7K6 275 aaPredicted RBP14.15□□□□□ -0.14
VCP-202ENST00000417448 HOGA1Q86XE5 327 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 LAX1Q8IWV1 398 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 DRAXINQ8NBI3 349 aaPredicted RBP14.15□□□□□ -0.14
VCP-202ENST00000417448 BEST4Q8NFU0 473 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 AP3S1Q92572 193 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 RITA1Q96K30 269 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 BCL7BQ9BQE9 202 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 ZNF251Q9BRH9 671 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 DCUN1D5Q9BTE7 237 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 EXTL2Q9UBQ6 330 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 ANXA10Q9UJ72 324 aa14.15□□□□□ -0.14
VCP-202ENST00000417448 SMIM31A0A1B0GVY4 71 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 LANCL1O43813 399 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 FAM106CPP0CH98 169 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 SRSF7Q16629 238 aaKnown RBP eCLIP14.14□□□□□ -0.15
VCP-202ENST00000417448 KHDC1LQ5JSQ8 128 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms