RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FAM90A8PA6NJQ4 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A7PA6NKC0 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A22PA8MWA6 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A12PA8MX19 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A5PA8MXJ8 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A23PA8MXZ1 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 AGPAT2O15120 278 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 TMPRSS2O15393 492 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 MPIG6BO95866 241 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 HAND1O96004 215 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 IFNA17P01571 189 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 OR8U9P0C7N5 309 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A15PP0C7V4 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 SEC11BP0C7V7 166 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A13PP0C7W8 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A14PP0C7W9 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FAM90A24PP0C7X0 464 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FCGR2CP31995 323 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 PRDX2P32119 198 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 GUK1Q16774 197 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 MPV17LQ2QL34 196 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 PLAC9Q5JTB6 97 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 AADACL3Q5VUY0 350 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 ZNF788Q6ZQV5 615 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 OR8B3Q8NGG8 313 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 OR8U1Q8NH10 309 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 NEIL1Q96FI4 390 aaPredicted RBP12.06□□□□□ -0.48
SGCE-202ENST00000415788 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 OR8B2Q96RD0 313 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 NICN1Q9BSH3 213 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 GSKIPQ9P0R6 139 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 FBXL17Q9UF56 701 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 OR14J1Q9UGF5 321 aa12.06□□□□□ -0.48
SGCE-202ENST00000415788 LRBAP50851 2863 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 A0A096LNT2 108 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 A0A1W2PP11 408 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 ADAM20O43506 726 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 DEDDO75618 318 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 IFNA2P01563 188 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 IFNA21P01568 189 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 SNRNP70P08621 437 aaKnown RBP12.05□□□□□ -0.48
SGCE-202ENST00000415788 OR8U8P0C7N1 319 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 GABRA2P47869 451 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 ARFRP1Q13795 201 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 AKIRIN2Q53H80 203 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 Q96M66 194 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 IL36RNQ9UBH0 155 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 STRAPQ9Y3F4 350 aaKnown RBP12.05□□□□□ -0.48
SGCE-202ENST00000415788 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
SGCE-202ENST00000415788 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
SGCE-202ENST00000415788 BORCS7-ASMTA0A0B4J1R7 106 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 A0A1B0GW64 132 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 SOCS1O15524 211 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 CA11O75493 328 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 CLN5O75503 358 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 HOXB5P09067 269 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 WNT2P09544 360 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 LMO1P25800 156 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 TMEM50BP56557 158 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 PIGYQ3MUY2 71 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 CD177Q8N6Q3 437 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 CCL13Q99616 98 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 PBDC1Q9BVG4 233 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 TM2D1Q9BX74 207 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 FAM234AQ9H0X4 552 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 BANF2Q9H503 90 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 A0A1W2PPE3 182 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 A0A1W2PPH5 198 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 M0R036 132 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 SNU13P55769 128 aaKnown RBP12.04□□□□□ -0.48
SGCE-202ENST00000415788 RAB2AP61019 212 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 LMO4P61968 165 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
SGCE-202ENST00000415788 LRRC10Q5BKY1 277 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 PPP1R35Q8TAP8 253 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 GAFA1Q96PS6 74 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
SGCE-202ENST00000415788 ITPR2Q14571 2701 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 ZNF729A6NN14 1252 aaPredicted RBP12.03□□□□□ -0.48
SGCE-202ENST00000415788 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
SGCE-202ENST00000415788 DEGS1O15121 323 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 GPR37O15354 613 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 NDUFB3O43676 98 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 OR7C1O76099 320 aaPredicted RBP12.03□□□□□ -0.48
SGCE-202ENST00000415788 OR2H2O95918 312 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 DUSP1P28562 367 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 COL10A1Q03692 680 aa12.03□□□□□ -0.48
SGCE-202ENST00000415788 TAF9Q16594 264 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms