RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 SORT1Q99523 831 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 CPNE1Q99829 537 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 MICU1Q9BPX6 476 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 RTL8AQ9BWD3 113 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 PAPOLGQ9BWT3 736 aaKnown RBP1.22□□□□□ -2.21
LINC00428-201ENST00000415620 HDHD2Q9H0R4 259 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 GAL3ST2Q9H3Q3 398 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 FBXL15Q9H469 300 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 TMEM38AQ9H6F2 299 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 POLE3Q9NRF9 147 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 ATPIF1Q9UII2 106 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 RPH3ALQ9UNE2 315 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 TFR2Q9UP52 801 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 SLC7A11Q9UPY5 501 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 N6AMT1Q9Y5N5 214 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 PUS1Q9Y606 427 aaKnown RBP eCLIP1.22□□□□□ -2.21
LINC00428-201ENST00000415620 LHFPL6Q9Y693 200 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 U3KQV3 271 aa1.22□□□□□ -2.21
LINC00428-201ENST00000415620 IGHV3OR16-12A0A075B7B8 117 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TRAV26-1A0A087WT03 109 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TMEM189A5PLL7 270 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 FAM231BA6NCW3 169 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RBFOX3A6NFN3 312 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ZNF705FA8MVS1 300 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 LOC110117498-PIK3R3F6TDL0 507 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 H3BUA1 57 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 M0R135 149 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HMGN4O00479 90 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CXCR6O00574 342 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CFLARO15519 480 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 SLC16A7O60669 478 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 NOS1APO75052 506 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TSPAN13O95857 204 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 MT-ATP6P00846 226 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 IGHV3-23P01764 117 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 PRH1P02810 166 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CHRNGP07510 517 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ASAH2BP0C7U1 165 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ZNF705DP0CH99 300 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ZNF705BP0CI00 300 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 APELAP0DMC3 54 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 DEFB130BP0DP73 79 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 DEFB130AP0DP74 79 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 SPP1P10451 314 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 VPREB1P12018 145 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 MLNP12872 115 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 GNRHRP30968 328 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 AQP2P41181 271 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 PTGFRP43088 359 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 OR1E2P47887 323 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ALDH3B2P48448 385 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 DAP3P51398 398 aaKnown RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 GPM6AP51674 278 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 DEFB131AP59861 70 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CACNG7P62955 275 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HIST1H3AP68431 136 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CDK16Q00536 496 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 GNA13Q14344 377 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 MAPK11Q15759 364 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TPRXLQ17RH7 258 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TIMM50Q3ZCQ8 353 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 PAN3Q58A45 887 aaKnown RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TMEM41BQ5BJD5 291 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ZNF506Q5JVG8 444 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 SPANXN3Q5MJ09 141 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HIST2H3PS2Q5TEC6 136 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 FAHD1Q6P587 224 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HAGHLQ6PII5 290 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HIST2H3AQ71DI3 136 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 NANOGNBQ7Z5D8 188 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CMC1Q7Z7K0 106 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TPRA1Q86W33 373 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 GPHB5Q86YW7 130 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 LINC00346Q8IVM7 164 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CLECL1Q8IZS7 167 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CENPLQ8N0S6 344 aaPredicted RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 LRTM2Q8N967 370 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 THAP8Q8NA92 274 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 OR4D6Q8NGJ1 314 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 OR52P1PQ8NH57 321 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 GRPEL2Q8TAA5 225 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 FBXO25Q8TCJ0 367 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TMEM37Q8WXS4 190 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 AQP3Q92482 292 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 EMG1Q92979 244 aaKnown RBP1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RNF170Q96K19 258 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CMTM3Q96MX0 182 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CLCC1Q96S66 551 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RETNLBQ9BQ08 111 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 ANP32EQ9BTT0 268 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 FAM192AQ9GZU8 254 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 OR51I2Q9H344 312 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RHOJQ9H4E5 214 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 C12orf10Q9HB07 376 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 HES4Q9HCC6 221 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RASL12Q9NYN1 266 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 TVP23BQ9NYZ1 205 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 CHMP5Q9NZZ3 219 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 XCL2Q9UBD3 114 aa1.21□□□□□ -2.22
LINC00428-201ENST00000415620 RPS6KB2Q9UBS0 482 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms