RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 MSI2Q96DH6 328 aaKnown RBP11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 CHIAQ9BZP6 476 aa11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 AMMECR1Q9Y4X0 333 aaPredicted RBP11.68□□□□□ -0.54
HMGA1P1-201ENST00000415560 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 KIAA1324LA8MWY0 1029 aaPredicted RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SLC31A2O15432 143 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SNAPC5O75971 98 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SIX6O95475 246 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 PRTN3P24158 256 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 DUTP33316 252 aaKnown RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 FAM71F2Q6NXP2 309 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SPAG16Q8N0X2 631 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 RBPMSQ93062 196 aaKnown RBP11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 C18orf12Q96KH6 178 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SPIN2AQ99865 258 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 SPIN2BQ9BPZ2 258 aa11.67□□□□□ -0.54
HMGA1P1-201ENST00000415560 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 SAA2-SAA4A0A096LPE2 208 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 CCSO14618 274 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 ADAP1O75689 374 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 C1QBP02746 253 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 SAA2P0DJI9 122 aaPredicted RBP11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 VDAC1P21796 283 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 LPAR6P43657 344 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 PRSS57Q6UWY2 283 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 BEND2Q8NDZ0 799 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 GPHA2Q96T91 129 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 NMES1Q9C002 83 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 ZFP57Q9NU63 452 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
HMGA1P1-201ENST00000415560 LRBAP50851 2863 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 HPRT1P00492 218 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 RRASP10301 218 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 DVL1P1P54792 670 aaPredicted RBP11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 H2BFSP57053 126 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 NCR3LG1Q68D85 454 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 ODF3L1Q8IXM7 274 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 OR2T35Q8NGX2 323 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 HYLS1Q96M11 299 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 UNKLQ9H9P5 680 aaKnown RBP11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
HMGA1P1-201ENST00000415560 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 TOX4O94842 621 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 CEACAM3P40198 252 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 CD300CQ08708 224 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 IAH1Q2TAA2 248 aaPredicted RBP11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 HLA-DRB5Q30154 266 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 DCAF12L2Q5VW00 463 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 ZNF833PQ6ZTB9 187 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 NOXA1Q86UR1 476 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 PNKDQ8N490 385 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 Q8N7P7 452 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 LSM10Q969L4 123 aaKnown RBP11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 AIFM2Q9BRQ8 373 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 GSKIPQ9P0R6 139 aa11.64□□□□□ -0.55
HMGA1P1-201ENST00000415560 LINC00473A8K010 186 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 B4DSR2 109 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 FAM157AC9JC47 383 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 TXNL1O43396 289 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 FCGR3BO75015 233 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 PROP1O75360 226 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 APOA2P02652 100 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 RLN2P04090 185 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 GAPDHP04406 335 aaKnown RBP11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 EPHA1P21709 976 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 COX7A1P24310 79 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 AKR1C2P52895 323 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 PAX2Q02962 417 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 ZNF816Q0VGE8 651 aaPredicted RBP11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 RTL8BQ17RB0 113 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 UTF1Q5T230 341 aa11.63□□□□□ -0.55
HMGA1P1-201ENST00000415560 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms