RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 CDAP32320 146 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 ADMP35318 185 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 CTRLP40313 264 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 HERV-K104P61576 105 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 SERF2P84101 59 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 FOXL1Q12952 345 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 TESK1Q15569 626 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 C18orf12Q96KH6 178 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 RFNGQ9Y644 331 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 PIGBOS1A0A0B4J2F0 54 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 RAMP3O60896 148 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 HLA-DOBP13765 273 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 AMMECR1LQ6DCA0 310 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 PEF1Q9UBV8 284 aaKnown RBP6.72□□□□□ -1.33
SIK3-203ENST00000415541 MCTS1Q9ULC4 181 aaKnown RBP6.72□□□□□ -1.33
SIK3-203ENST00000415541 NUP210LQ5VU65 1888 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 ZNF407Q9C0G0 2248 aa6.72□□□□□ -1.33
SIK3-203ENST00000415541 TRAPPC2LH3BP13 241 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 MRPL33O75394 65 aaKnown RBP6.71□□□□□ -1.33
SIK3-203ENST00000415541 KITLGP21583 273 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 MDH2P40926 338 aaKnown RBP6.71□□□□□ -1.33
SIK3-203ENST00000415541 THBS3P49746 956 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 FXYD4P59646 89 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 RTP5Q14D33 572 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 CNN3Q15417 329 aaKnown RBP6.71□□□□□ -1.33
SIK3-203ENST00000415541 DEFB109BQ30KR1 87 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 PHLDA2Q53GA4 152 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 SP5Q6BEB4 398 aaPredicted RBP6.71□□□□□ -1.33
SIK3-203ENST00000415541 FAM57BQ71RH2 274 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 CNEP1R1Q8N9A8 125 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 SUMF1Q8NBK3 374 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 OR10P1Q8NGE3 313 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 NEIL1Q96FI4 390 aaPredicted RBP6.71□□□□□ -1.33
SIK3-203ENST00000415541 TSPAN32Q96QS1 320 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 RTN4RQ9BZR6 473 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 RPRMQ9NS64 109 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 ELOVL5Q9NYP7 299 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 RNF115Q9Y4L5 304 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 PCDH15Q96QU1 1955 aa6.71□□□□□ -1.33
SIK3-203ENST00000415541 SPTBN1Q01082 2364 aaKnown RBP6.71□□□□□ -1.34
SIK3-203ENST00000415541 IGKV3D-11A0A0A0MRZ8 115 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 SERTM2A0A1B0GWG4 89 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 C17orf112F2Z3M2 114 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 GNG7O60262 68 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 CTLA4P16410 223 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 YPEL3P61236 119 aaPredicted RBP6.71□□□□□ -1.34
SIK3-203ENST00000415541 HLA-DRB5Q30154 266 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 TCF24Q7RTU0 167 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 OR11L1Q8NGX0 322 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 C11orf40Q8WZ69 217 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 TRAV9-1A0A075B6T8 112 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 C19orf67A6NJJ6 358 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 OR10J4P0C629 311 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 IL11P20809 199 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 MC5RP33032 325 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 ZNF90Q03938 601 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 PLP2Q04941 152 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 PSG3Q16557 428 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 FAM89BQ8N5H3 189 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 ZNF519Q8TB69 540 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 PSMG3Q9BT73 122 aaPredicted RBP6.71□□□□□ -1.34
SIK3-203ENST00000415541 CHRNA10Q9GZZ6 450 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 NRN1Q9NPD7 142 aa6.71□□□□□ -1.34
SIK3-203ENST00000415541 A0A1B0GUS0 222 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 HS3ST1O14792 307 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 RAD51DO75771 328 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 GPX1P07203 203 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 RRADP55042 308 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 CLDN15P56746 228 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 TMEM267Q0VDI3 215 aaPredicted RBP6.7□□□□□ -1.34
SIK3-203ENST00000415541 Q0VG73 95 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 LYPD6Q86Y78 171 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 SGMS2Q8NHU3 365 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 LIPHQ8WWY8 451 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 ATP6V0BQ99437 205 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 KLHDC3Q9BQ90 382 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 C12orf49Q9H741 205 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 PLEKHJ1Q9NW61 149 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 WASHC3Q9Y3C0 194 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 TBL2Q9Y4P3 447 aaKnown RBP6.7□□□□□ -1.34
SIK3-203ENST00000415541 OR51B2Q9Y5P1 312 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 J3QR06 171 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 TMEM50BP56557 158 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 SELENOVP59797 346 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 EIF3IQ13347 325 aaKnown RBP6.7□□□□□ -1.34
SIK3-203ENST00000415541 OR1C1Q15619 314 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 WFDC8Q8IUA0 241 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 LRRC75AQ8NAA5 344 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 TMEM171Q8WVE6 324 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 MRPL18Q9H0U6 180 aaKnown RBP6.7□□□□□ -1.34
SIK3-203ENST00000415541 SPTBN5Q9NRC6 3674 aaKnown RBP6.7□□□□□ -1.34
SIK3-203ENST00000415541 G3V4G9 280 aa6.7□□□□□ -1.34
SIK3-203ENST00000415541 KLRC4-KLRK1H3BQV0 150 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms