RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 TMEM249Q2WGJ8 235 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 SP6Q3SY56 376 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 LDLRAD2Q5SZI1 272 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 FAHD2BQ6P2I3 314 aaPredicted RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 C1orf122Q6ZSJ8 110 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 CMTM1Q8IZ96 169 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 CASTOR1Q8WTX7 329 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 FAHD2AQ96GK7 314 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 TP53RKQ96S44 253 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 OR51J1Q9H342 316 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 NAA60Q9H7X0 242 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 UNKLQ9H9P5 680 aaKnown RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 LINC00473A8K010 186 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 TOX4O94842 621 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 SFT2D2O95562 160 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 IGHV4-31P0DP07 118 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 ANKRD55Q3KP44 614 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 LIN54Q6MZP7 749 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 LINC00311Q8N616 119 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 C8orf31Q8N9H6 132 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 CCDC71LQ8N9Z2 235 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 OR4P4Q8NGL7 312 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 OR10X1Q8NGY0 326 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 ZNF431Q8TF32 576 aaPredicted RBP7.87□□□□□ -1.15
RIF1-202ENST00000414861 FAM216AQ8WUB2 273 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 HIF1ANQ9NWT6 349 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 SONP18583 2426 aaKnown RBP7.87□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PRD5 423 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PRF3 423 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PRM7 423 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 M0R1X1 148 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 RAB29O14966 203 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 CREBL2O60519 120 aaPredicted RBP7.87□□□□□ -1.15
RIF1-202ENST00000414861 REG1BP48304 166 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 BCAP31P51572 246 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 HLA-DRB5Q30154 266 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 OR2B11Q5JQS5 317 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 SGPP2Q8IWX5 399 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 TMEM186Q96B77 213 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 AKR1E2Q96JD6 320 aa7.87□□□□□ -1.15
RIF1-202ENST00000414861 ODF3BA8MYP8 253 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 F2RP25116 425 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 BRWD1-AS2P59051 145 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 MSMO1Q15800 293 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 C2orf68Q2NKX9 166 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 BEND2Q8NDZ0 799 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 OR11H6Q8NGC7 330 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 OR13D1Q8NGV5 346 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 LHFPL5Q8TAF8 219 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 LHX4Q969G2 390 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ST6GALNAC6Q969X2 333 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 GALNT14Q96FL9 552 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 GPN1Q9HCN4 374 aaPredicted RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 PIPOXQ9P0Z9 390 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ITGB1BP2Q9UKP3 347 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 C3orf85A0A1B0GTC6 90 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 A8MV72 311 aaPredicted RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 SNRPGP15A8MWD9 76 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 TOR1AO14656 332 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 DUS4LO95620 317 aaKnown RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 IFNA2P01563 188 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ARG1P05089 322 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 PAX6P26367 422 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 DUTP33316 252 aaKnown RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 ZNF137PP52743 207 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 TMEM187Q14656 261 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 NCR3LG1Q68D85 454 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ZNF833PQ6ZTB9 187 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 ZBTB34Q8NCN2 500 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 GLYATL2Q8WU03 294 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 MITD1Q8WV92 249 aa7.86□□□□□ -1.15
RIF1-202ENST00000414861 MRPL20Q9BYC9 149 aaKnown RBP7.86□□□□□ -1.15
RIF1-202ENST00000414861 SETXQ7Z333 2677 aaKnown RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 TRAV20A0A0B4J274 112 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 BUB1B-PAK6H3BSN5 160 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 SMAD7O15105 426 aaKnown RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 SSNA1O43805 119 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 RAMP3O60896 148 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 SLC22A5O76082 557 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 AVPP01185 164 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 FCN2Q15485 313 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 KCTD9Q7L273 389 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 LHFPL4Q7Z7J7 247 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 UXS1Q8NBZ7 420 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 C17orf50Q8WW18 174 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 HEXA-AS1Q9H8Q6 139 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 GAB2Q9UQC2 676 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 IGHV3OR16-10A0A075B7F0 116 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 H0Y980 276 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 TGFAP01135 160 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 CXCL3P19876 107 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 S100GP29377 79 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 RRAS2P62070 204 aaPredicted RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 C12orf45Q8N5I9 185 aaPredicted RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 ZNF383Q8NA42 475 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms