RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
ACTB-202ENST00000414620 Q9N2K0 584 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 C12orf4Q9NQ89 552 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 WASHC3Q9Y3C0 194 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 ZBTB25P24278 435 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 CRHBPP24387 322 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 SLURP1P55000 103 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 CX3CL1P78423 397 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 DCUN1D4Q92564 292 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 FAM3DQ96BQ1 224 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 MGLLQ99685 303 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 HSF4Q9ULV5 492 aa12.06□□□□□ -0.48
ACTB-202ENST00000414620 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
ACTB-202ENST00000414620 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
ACTB-202ENST00000414620 COL7A1Q02388 2944 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 IGKV1-6A0A0C4DH72 117 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 TMEM272A0A1B0GTI8 110 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 ITGB1BP1O14713 200 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 PSMA1P25786 263 aaKnown RBP12.05□□□□□ -0.48
ACTB-202ENST00000414620 MC5RP33032 325 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 C2orf76Q3KRA6 126 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 C19orf54Q5BKX5 351 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
ACTB-202ENST00000414620 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 OR5AN1Q8NGI8 311 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 CNBD2Q96M20 576 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 ASCL2Q99929 193 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.05□□□□□ -0.48
ACTB-202ENST00000414620 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
ACTB-202ENST00000414620 MGAT4AQ9UM21 535 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
ACTB-202ENST00000414620 V9GY05 133 aa12.05□□□□□ -0.48
ACTB-202ENST00000414620 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 A0A087WW49 117 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 OVOL1O14753 267 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
ACTB-202ENST00000414620 PROP1O75360 226 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 CA2P00918 260 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 CD3GP09693 182 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
ACTB-202ENST00000414620 OR10A3P58181 314 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 RUNX1Q01196 453 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 PSG5Q15238 335 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 MOGAT2Q3SYC2 334 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 PRSS48Q7RTY5 328 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 PPP1R27Q86WC6 154 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 ZNF383Q8NA42 475 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 OR56B1Q8NGI3 324 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 WWC2-AS2Q96NR7 200 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 TPSG1Q9NRR2 321 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 RDH8Q9NYR8 311 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 ZNF221Q9UK13 617 aa12.04□□□□□ -0.48
ACTB-202ENST00000414620 A0A075B6Q4 140 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 M0R1X1 148 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 RBBP9O75884 186 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 IGKV1-16P04430 117 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 TFAP2AP05549 437 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 CRIP2P52943 208 aaPredicted RBP12.03□□□□□ -0.48
ACTB-202ENST00000414620 TPPP2P59282 170 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 RPS16P62249 146 aaKnown RBP12.03□□□□□ -0.48
ACTB-202ENST00000414620 SSX1Q16384 188 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 DLX4Q92988 240 aaPredicted RBP12.03□□□□□ -0.48
ACTB-202ENST00000414620 TOLLIPQ9H0E2 274 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 NUBP2Q9Y5Y2 271 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 SORL1Q92673 2214 aa12.03□□□□□ -0.48
ACTB-202ENST00000414620 A0A0B4J203 849 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 SHISA3A0PJX4 238 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 TRDCB7Z8K6 153 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 LINC01619G3V211 115 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 BET1O15155 118 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 SLC25A17O43808 307 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 SAP30O75446 220 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 APOA2P02652 100 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 LGALS1P09382 135 aaKnown RBP12.02□□□□□ -0.49
ACTB-202ENST00000414620 MRPS15P82914 257 aaKnown RBP12.02□□□□□ -0.49
ACTB-202ENST00000414620 ACTBL2Q562R1 376 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 ZNF367Q7RTV3 350 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 TCTEX1D1Q8N7M0 179 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 GRPEL2Q8TAA5 225 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 PTX4Q96A99 478 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 OR2D2Q9H210 308 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 GHITMQ9H3K2 345 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 ACOT13Q9NPJ3 140 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 SLC35D1Q9NTN3 355 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 RAB22AQ9UL26 194 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.49
ACTB-202ENST00000414620 SMIM30A4D0T7 59 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms