RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 DNLZQ5SXM8 178 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FAM27D1Q5T7N8 215 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 PRR9Q5T870 116 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RAET1LQ5VY80 246 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TMEM91Q6ZNR0 172 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 LINC00471Q8N535 108 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZFP41Q8N8Y5 198 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CYB561A3Q8NBI2 242 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR7G1Q8NGA0 311 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR9Q1Q8NGQ5 310 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR6N1Q8NGY5 312 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR5J2Q8NH18 312 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR5B3Q8NH48 314 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR52N1Q8NH53 320 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CT45A3Q8NHU0 189 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 LINC01560Q8TB33 94 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 PIGXQ8TBF5 258 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TEX47Q8TBZ9 253 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 BORCS5Q969J3 196 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 PTX4Q96A99 478 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RBMXL1Q96E39 390 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR5B12Q96R08 314 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 AMELYQ99218 206 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 MROQ9BYG7 248 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 SRRQ9GZT4 340 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCDC90BQ9GZT6 254 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ARMC7Q9H6L4 198 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CMC2Q9NRP2 79 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 C14orf105Q9NVL8 296 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FAIMQ9NVQ4 179 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TXNL4BQ9NX01 149 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 SCN3BQ9NY72 215 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TVP23BQ9NYZ1 205 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ENOPH1Q9UHY7 261 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TBC1D24Q9ULP9 559 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ERGIC3Q9Y282 383 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CAB39Q9Y376 341 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RHBDD3Q9Y3P4 386 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FAM32AQ9Y421 112 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CABIN1Q9Y6J0 2220 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 DNAH14Q0VDD8 3507 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 KNL1Q8NG31 2342 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 MED12Q93074 2177 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 MED13Q9UHV7 2174 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A075B6Q4 140 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRAV6A0A075B6T7 132 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGLV3-32A0A0A0MS00 114 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRBV9A0A0B4J1U6 114 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGKV1D-43A0A0B4J1Z2 117 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRDV1A0A1B0GX56 115 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A1W2PQD3 144 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 TMEM72A0PK05 275 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SMCO3A2RU48 225 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CLDN25C9JDP6 229 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 H3BN98 237 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 H7C1C5 153 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 DNASE2O00115 360 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 GABRPO00591 440 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 MYL12BO14950 172 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 TOX3O15405 576 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PIN1P1O15428 100 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 ALOX12BO75342 701 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 UPK1BO75841 260 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR2J3O76001 311 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 AQP8O94778 261 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CSTAP01040 98 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 HLA-DQB1P01920 261 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SERPINE2P07093 398 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 HIST1H1CP16403 213 aaKnown RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 GTF2E2P29084 291 aaKnown RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 EVI2BP34910 448 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PPICP45877 212 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SERPINB10P48595 397 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 P2RX1P51575 399 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PSMD7P51665 324 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PSMD4P55036 377 aaKnown RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CAV3P56539 151 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CLDN6P56747 220 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SYNJ2BPP57105 145 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PPP1CBP62140 327 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 LCN6P62502 163 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 RPL18Q07020 188 aaKnown RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SIGLEC14Q08ET2 396 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 FOXF1Q12946 379 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 DYNC1I2Q13409 638 aaKnown RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDK5R1Q15078 307 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 NCF4Q15080 339 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF404Q494X3 552 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 KPRPQ5T749 579 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 C22orf42Q6IC83 251 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 NIPAL1Q6NVV3 410 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 SMARCD3Q6STE5 483 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF322Q6U7Q0 402 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CASP12Q6UXS9 341 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDH26Q8IXH8 852 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 STX19Q8N4C7 294 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 DEFB123Q8N688 67 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PLPP5Q8NEB5 264 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 ATP6V1C2Q8NEY4 427 aa1.98□□□□□ -2.09
HMGB1P11-201ENST00000413899 PROKR2Q8NFJ6 384 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms