RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CHMP1AQ9HD42 196 aaPredicted RBP10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 GHRLQ9UBU3 117 aa10.89□□□□□ -0.67
HLA-DQB2-229ENST00000411527 H0Y980 276 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SLC22A1O15245 554 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CPEP16870 476 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 RPS16P62249 146 aaKnown RBP10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 FXYD3Q14802 87 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 OR10K2Q6IF99 312 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SVOPQ8N4V2 548 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 DRAXINQ8NBI3 349 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 OR5T1Q8NG75 326 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 GRPEL2Q8TAA5 225 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 AGMATQ9BSE5 352 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TMED9Q9BVK6 235 aa10.88□□□□□ -0.67
HLA-DQB2-229ENST00000411527 A0A0G2JLM5 398 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 JTBO76095 146 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CELP19835 753 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CEACAM6P40199 344 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TAS2R43P59537 309 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 RPS27AP62979 156 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 C10orf67Q8IYJ2 551 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 POC5Q8NA72 575 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 OR9G4Q8NGQ1 327 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TSNAXQ99598 290 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 FAM53CQ9NYF3 392 aa10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 NKX1-2Q9UD57 310 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ITGB1BP1O14713 200 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 PROP1O75360 226 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CNIH1O95406 144 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 NAPSAO96009 420 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 UBBP0CG47 229 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 HTR2CP28335 458 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 LINC00205P59089 165 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ST3GAL4Q11206 333 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 GGHQ92820 318 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TMEM59Q9BXS4 323 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SMPD3Q9NY59 655 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 OR1A1Q9P1Q5 309 aa10.86□□□□□ -0.67
HLA-DQB2-229ENST00000411527 H3BUA1 57 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SLC25A17O43808 307 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 SPDEFO95238 335 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZBTB25P24278 435 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 MAPK3P27361 379 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 MOGAT2Q3SYC2 334 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 MOB1BQ7L9L4 216 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZNF383Q8NA42 475 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 KCNG3Q8TAE7 436 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 NICN1Q9BSH3 213 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 S100A14Q9HCY8 104 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 PLEKHJ1Q9NW61 149 aa10.85□□□□□ -0.67
HLA-DQB2-229ENST00000411527 EFCAB10A6NFE3 127 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CD1AP06126 327 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TATDN3Q17R31 274 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 Q8N402 240 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 IL17DQ8TAD2 202 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 THRSPQ92748 146 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 THAP7Q9BT49 309 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 TM2D1Q9BX74 207 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 KCNK15Q9H427 330 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 RETNQ9HD89 108 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 PEF1Q9UBV8 284 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 ADAM30Q9UKF2 790 aa10.84□□□□□ -0.67
HLA-DQB2-229ENST00000411527 IZUMO1RA6ND01 250 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 APOA2P02652 100 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 CSN3P07498 182 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 AADACP22760 399 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 DEFA5Q01523 94 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 UNC119Q13432 240 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 INSL4Q14641 139 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 C1orf100Q5SVJ3 147 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 PDPNQ86YL7 162 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 PTX4Q96A99 478 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 HDHD3Q9BSH5 251 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 AK3Q9UIJ7 227 aa10.83□□□□□ -0.68
HLA-DQB2-229ENST00000411527 A0A0A6YYD4 124 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 TRBV6-6A0A0A6YYG2 114 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 SHISA3A0PJX4 238 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 TRBV12-3P01733 135 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 SCTP09683 121 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 LGALS7P47929 136 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 WNT4P56705 351 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 HLA-DRB3P79483 266 aa10.82□□□□□ -0.68
HLA-DQB2-229ENST00000411527 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms