RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 M0R1X1 148 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCNB2O95067 398 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A6P0DMU7 189 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A5P0DMU8 189 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A7P0DMV0 189 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 COX4I1P13073 169 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 FKBP2P26885 142 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TM4SF1P30408 202 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CTNNA1P35221 906 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MDH1P40925 334 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 SERPINH1P50454 418 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2B8PP59922 312 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 FKBP1AP62942 108 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRDNQ13061 729 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TTF1Q15361 905 aaPredicted RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TCHHL1Q5QJ38 904 aaPredicted RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CNIH2Q6PI25 160 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ALKAL1Q6UXT8 129 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q6ZSR6 202 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ARHGAP18Q8N392 663 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 LIX1Q8N485 282 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TTC9CQ8N5M4 171 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 DRAM1Q8N682 238 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ARFGAP2Q8N6H7 521 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC63Q8NA47 563 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR5H2Q8NGV7 314 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 GIPC3Q8TF64 312 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 FBXO32Q969P5 355 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM45BQ96B21 275 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CMBLQ96DG6 245 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CPNE2Q96FN4 548 aaPredicted RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 HSFY1Q96LI6 401 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CNBD2Q96M20 576 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MS4A4EQ96PG1 132 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRNT1Q96Q11 434 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 NUDCD1Q96RS6 583 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM175Q9BSA9 504 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 BCL2L13Q9BXK5 485 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 NUP62CLQ9H1M0 184 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLKQ9H2G2 1235 aaPredicted RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 C11orf1Q9H5F2 150 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 SH2D4AQ9H788 454 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TUFT1Q9NNX1 390 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 NMRK1Q9NWW6 199 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMOD3Q9NYL9 352 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TAS2R10Q9NYW0 307 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRIM10Q9UDY6 481 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TBK1Q9UHD2 729 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ENPP5Q9UJA9 477 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 HHLA2Q9UM44 414 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 CHCHD2Q9Y6H1 151 aaPredicted RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 EEA1Q15075 1411 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ZC3H13Q5T200 1668 aaKnown RBP-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MYH7P12883 1935 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 WDR19Q8NEZ3 1342 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 FANCIQ9NVI1 1328 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MYO5AQ9Y4I1 1855 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGLV5-48A0A075B6I7 105 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRBV20-1A0A075B6N2 111 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 NSG1A0A0A6YYJ2 146 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAV24A0A0B4J272 114 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GOLGA8QA0A0J9YX86 632 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBE2L5PA0A1B0GUS4 154 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GOLGA8OA6NCC3 632 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GGT3PA6NGU5 568 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GOLGA8NF8WBI6 632 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 hCG_2039718K7EN88 272 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TXNDC9O14530 226 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAPK13O15264 365 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CREBL2O60519 120 aaPredicted RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CST7O76096 145 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 PROSCO94903 275 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GADD45GO95257 159 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 UTS2O95399 124 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SYNGR4O95473 234 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RLN1P04808 185 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SERPINE1P05121 402 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GALTP07902 379 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ANXA6P08133 673 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 BAALC-AS2P0C853 105 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 STAG3L1P0CL83 205 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 EPB41P11171 864 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 HLA-DRB4P13762 266 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 EPCAMP16422 314 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 NPPCP23582 126 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 VAMP1P23763 118 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCND1P24385 295 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ANXA13P27216 316 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 LAP3P28838 519 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 AKT2P31751 481 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDAP32320 146 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ADD2P35612 726 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CEACAM3P40198 252 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GNAQP50148 359 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCR4P51679 360 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLDN12P56749 244 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TAS2R40P59535 323 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TAS2R41P59536 307 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 GMFBP60983 142 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACTR2P61160 394 aa-2.45□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms