RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 PNLIPP16233 465 aa11.27□□□□□ -0.61
COL6A3-206ENST00000409809 MARS2Q96GW9 593 aaKnown RBP11.27□□□□□ -0.61
COL6A3-206ENST00000409809 CXXC4Q9H2H0 198 aa11.27□□□□□ -0.61
COL6A3-206ENST00000409809 RPL36A-HNRNPH2H7BZ11 118 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 C17orf99Q6UX52 265 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 KISS1RQ969F8 398 aaPredicted RBP11.26□□□□□ -0.61
COL6A3-206ENST00000409809 IL2RAP01589 272 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 SRD5A2P31213 254 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 UCP3P55916 312 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.26□□□□□ -0.61
COL6A3-206ENST00000409809 LRTM2Q8N967 370 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 WNT5BQ9H1J7 359 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 MARCH11A6NNE9 402 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 TSPAN2O60636 221 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 KIAA0040Q15053 153 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 ZNF418Q8TF45 676 aaPredicted RBP11.26□□□□□ -0.61
COL6A3-206ENST00000409809 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 ZDBF2Q9HCK1 2354 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 OR8B2Q96RD0 313 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 EP300Q09472 2414 aaPredicted RBP11.26□□□□□ -0.61
COL6A3-206ENST00000409809 H0YL77 283 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 H3BRM9 83 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 A8MWV9 139 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 ZNF750Q32MQ0 723 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 GNB1LQ9BYB4 327 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 H7C2G1 150 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 HYAL3O43820 417 aaPredicted RBP11.26□□□□□ -0.61
COL6A3-206ENST00000409809 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 YAE1D1Q9NRH1 226 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
COL6A3-206ENST00000409809 TNFSF13O75888 250 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
COL6A3-206ENST00000409809 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 IGHV1-69-2A0A0G2JMI3 117 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 UBE2V1Q13404 147 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 INSL4Q14641 139 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 NR2C2APQ86WQ0 139 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 H2BFSP57053 126 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 ANKRD33Q7Z3H0 272 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 OR4D9Q8NGE8 314 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
COL6A3-206ENST00000409809 NPTNQ9Y639 398 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 ZNF841Q6ZN19 808 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TMEM252Q8N6L7 170 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 H7C1H1 209 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TSPO2Q5TGU0 170 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 SLC37A2Q8TED4 501 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 A0A1B0GW64 132 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 RAE1P78406 368 aaKnown RBP11.25□□□□□ -0.61
COL6A3-206ENST00000409809 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TMEM208Q9BTX3 173 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 ST6GALNAC2Q9UJ37 374 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 DNASE2O00115 360 aaPredicted RBP11.25□□□□□ -0.61
COL6A3-206ENST00000409809 CCSMST1Q4G0I0 132 aa11.25□□□□□ -0.61
COL6A3-206ENST00000409809 TMEM202A6NGA9 273 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 CCDC144NLQ6NUI1 221 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-206ENST00000409809 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 CTLA4P16410 223 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 KLK13Q9UKR3 277 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 PRSS2P07478 247 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 FMC1Q96HJ9 113 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 PHLDA3Q9Y5J5 127 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 LY75O60449 1722 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 TRBV5-5A0A0J9YX44 114 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 GLULP15104 373 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 SMOC1Q9H4F8 434 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 ANKRD10Q9NXR5 420 aa11.24□□□□□ -0.61
COL6A3-206ENST00000409809 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
COL6A3-206ENST00000409809 ASAH2BP0C7U1 165 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms