RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 ZNF774Q6NX45 483 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 K7N7A8 449 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 VENTXO95231 258 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 ZGLP1P0C6A0 271 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 LCN2P80188 198 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 MESTQ5EB52 335 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 NR2C2APQ86WQ0 139 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 OR13H1Q8NG92 308 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 LINC00869P0C866 280 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 TBL2Q9Y4P3 447 aaKnown RBP12.14□□□□□ -0.47
AFF3-202ENST00000409236 GDF9O60383 454 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 ZNF117Q03924 483 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 ATOH7Q8N100 152 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 SDK2Q58EX2 2172 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 FOXF1Q12946 379 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 PRSS27Q9BQR3 290 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 V9GYH0 126 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 ECSCRQ19T08 205 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 HPRT1P00492 218 aa12.14□□□□□ -0.47
AFF3-202ENST00000409236 SNRPD3P62318 126 aaKnown RBP12.14□□□□□ -0.47
AFF3-202ENST00000409236 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 FAM157AC9JC47 383 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 NUBP1P53384 320 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 CX3CL1P78423 397 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 AGERQ15109 404 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 TIMM23BQ5SRD1 257 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 PCMT1P22061 227 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 LRP6O75581 1613 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 KLK8O60259 260 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
AFF3-202ENST00000409236 IGHV3-43A0A0B4J1X8 118 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 IGHV3-43DP0DP04 118 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 ZNF83P51522 516 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 KIRREL2Q6UWL6 708 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 RNF182Q8N6D2 247 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 MBD1Q9UIS9 605 aaPredicted RBP12.13□□□□□ -0.47
AFF3-202ENST00000409236 XIRP1Q702N8 1843 aaKnown RBP12.13□□□□□ -0.47
AFF3-202ENST00000409236 IGHV3-20A0A0C4DH32 117 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 CRPP02741 224 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 Q6AWC8 147 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 RFESDQ8TAC1 157 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 CXCL13O43927 109 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 SLC25A15Q9Y619 301 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 A8MWV9 139 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 GUCA2BQ16661 112 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 SPSB4Q96A44 273 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
AFF3-202ENST00000409236 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
AFF3-202ENST00000409236 EML2O95834 649 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 BADQ92934 168 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 OLIG3Q7RTU3 272 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 IGLV3-10A0A075B6K4 115 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 RIPPLY3P57055 190 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 BIVMQ86UB2 503 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 VN1R2Q8NFZ6 395 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 EML6Q6ZMW3 1958 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 MIXL1Q9H2W2 232 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 DDX60LQ5H9U9 1706 aaKnown RBP12.12□□□□□ -0.47
AFF3-202ENST00000409236 C3orf80F5H4A9 247 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
AFF3-202ENST00000409236 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 GFRA1P56159 465 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 SEC11AP67812 179 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 ORAI1Q96D31 301 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 HEXA-AS1Q9H8Q6 139 aa12.12□□□□□ -0.47
AFF3-202ENST00000409236 DLL1O00548 723 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 ODAMA1E959 279 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 ZNF688P0C7X2 276 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 ORAOV1Q8WV07 137 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 RCC1P18754 421 aaPredicted RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 TRGV5A0A0B4J1U4 118 aa12.11□□□□□ -0.47
AFF3-202ENST00000409236 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
AFF3-202ENST00000409236 KLK15Q9H2R5 256 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms