RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ZBTB34Q8NCN2 500 aa16.65■□□□□ 0.26
CHKB-201ENST00000406938 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
CHKB-201ENST00000406938 GHITMQ9H3K2 345 aa16.65■□□□□ 0.26
CHKB-201ENST00000406938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.65■□□□□ 0.266e-9■■■■□ 21.2
CHKB-201ENST00000406938 WNK2Q9Y3S1 2297 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 hCG_2014768A0A024R1R8 64 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 TEX13DA0A0J9YY54 714 aaPredicted RBP16.64■□□□□ 0.25
CHKB-201ENST00000406938 PGLYRP1O75594 196 aaPredicted RBP16.64■□□□□ 0.25
CHKB-201ENST00000406938 HLA-AP01891 365 aaKnown RBP16.64■□□□□ 0.25
CHKB-201ENST00000406938 VAMP1P23763 118 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 SUPT4H1P63272 117 aaKnown RBP16.64■□□□□ 0.25
CHKB-201ENST00000406938 DHODHQ02127 395 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 EIF4EBP1Q13541 118 aaPredicted RBP16.64■□□□□ 0.25
CHKB-201ENST00000406938 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 OR52B4Q8NGK2 314 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 GAB2Q9UQC2 676 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 ALG5Q9Y673 324 aa16.64■□□□□ 0.25
CHKB-201ENST00000406938 A0A1W2PRD5 423 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 A0A1W2PRF3 423 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 A0A1W2PRM7 423 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 M0R1X1 148 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 MPPED1O15442 326 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 IL5P05113 134 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 ZNF137PP52743 207 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 DHRS2Q13268 280 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 SGPP2Q8IWX5 399 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 OR51H1Q8NH63 302 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 NAA60Q9H7X0 242 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 ZNF469Q96JG9 3925 aaPredicted RBP16.63■□□□□ 0.25
CHKB-201ENST00000406938 A0A0A6YYJ9 748 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 BUB1B-PAK6H3BSN5 160 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 IL3RAP26951 378 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 ZNF833PQ6ZTB9 187 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 LYG2Q86SG7 212 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 DRAXINQ8NBI3 349 aaPredicted RBP16.63■□□□□ 0.25
CHKB-201ENST00000406938 ST6GALNAC6Q969X2 333 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 S1PR3Q99500 378 aa16.63■□□□□ 0.25
CHKB-201ENST00000406938 AMMECR1Q9Y4X0 333 aaPredicted RBP16.63■□□□□ 0.25
CHKB-201ENST00000406938 ZANQ9Y493 2812 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 C9orf170A2RU37 121 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 C7orf66A4D0T2 115 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 J3QLI3 93 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 UBE2E1P51965 193 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 CBX3Q13185 183 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 DIAPH2-AS1Q14236 149 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 SLC9A3R2Q15599 337 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
CHKB-201ENST00000406938 MYO9AB2RTY4 2548 aa16.62■□□□□ 0.25
CHKB-201ENST00000406938 FLNAP21333 2647 aaKnown RBP16.61■□□□□ 0.25
CHKB-201ENST00000406938 TRAV40A0A0B4J280 105 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 C3orf85A0A1B0GTC6 90 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 PFDN1O60925 122 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 SFT2D2O95562 160 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 F2RP25116 425 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 DUTP33316 252 aaKnown RBP16.61■□□□□ 0.25
CHKB-201ENST00000406938 REG1BP48304 166 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 LINC00205P59089 165 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 RPL30P62888 115 aaKnown RBP16.61■□□□□ 0.25
CHKB-201ENST00000406938 KCTD9Q7L273 389 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 CASTOR1Q8WTX7 329 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 TP53RKQ96S44 253 aa16.61■□□□□ 0.25
CHKB-201ENST00000406938 HSD17B10Q99714 261 aaKnown RBP16.61■□□□□ 0.25
CHKB-201ENST00000406938 CENPVL3A0A0U1RRI6 287 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 LINC00473A8K010 186 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 RNF212BA8MTL3 300 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 AVPP01185 164 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 OR5AC1P0C628 307 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 HTR1DP28221 377 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 SP6Q3SY56 376 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 LDLRAD2Q5SZI1 272 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 FAM71F2Q6NXP2 309 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 ZNF66Q6ZN08 573 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 LHFPL4Q7Z7J7 247 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 ZNF431Q8TF32 576 aaPredicted RBP16.6■□□□□ 0.25
CHKB-201ENST00000406938 TCTEX1D2Q8WW35 142 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 GALNT14Q96FL9 552 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 OTOGQ6ZRI0 2925 aa16.6■□□□□ 0.25
CHKB-201ENST00000406938 CREBL2O60519 120 aaPredicted RBP16.59■□□□□ 0.25
CHKB-201ENST00000406938 IFNA2P01563 188 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 CATR1Q13166 79 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 C11orf88Q6PI97 169 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 MRPL20Q9BYC9 149 aaKnown RBP16.59■□□□□ 0.25
CHKB-201ENST00000406938 LIN7CQ9NUP9 197 aaKnown RBP16.59■□□□□ 0.25
CHKB-201ENST00000406938 PRR13Q9NZ81 148 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 KCNIP3Q9Y2W7 256 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 SVEP1Q4LDE5 3571 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 IGHV3OR16-10A0A075B7F0 116 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 SNRPGP15A8MWD9 76 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 H0Y980 276 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 LY6LH3BQJ8 138 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 TGIF2LXQ8IUE1 241 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 RPEQ96AT9 228 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 OR51J1Q9H342 316 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 DPM3Q9P2X0 92 aa16.59■□□□□ 0.25
CHKB-201ENST00000406938 LEUTXA8MZ59 168 aa16.58■□□□□ 0.24
CHKB-201ENST00000406938 DUS4LO95620 317 aaKnown RBP16.58■□□□□ 0.24
CHKB-201ENST00000406938 IGHV4-38-2P0DP08 117 aa16.58■□□□□ 0.24
CHKB-201ENST00000406938 ANXA3P12429 323 aa16.58■□□□□ 0.24
CHKB-201ENST00000406938 SAA4P35542 130 aa16.58■□□□□ 0.24
CHKB-201ENST00000406938 LGALS4P56470 323 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms