RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	LINC00470	Q9BZP3	86 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SMDT1	Q9H4I9	107 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HKR1	P10072	659 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	GCSH	P23434	173 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	OR10J1	P30954	320 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CCKAR	P32238	428 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SELENOH	Q8IZQ5	122 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	WDR31	Q8NA23	367 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	TMEM45B	Q96B21	275 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	OR10C1	Q96KK4	312 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CALY	Q9NYX4	217 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FAM74A7	A6NL05	159 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RAMP1	O60894	148 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CSN3	P07498	182 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	TMPRSS3	P57727	454 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RHOV	Q96L33	236 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CISD1	Q9NZ45	108 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HIGD1A	Q9Y241	93 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	PXMP4	Q9Y6I8	212 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HOXA6	P31267	233 aa		11.43	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RFPL3S	P0C7P2	107 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FAM87A	P0C7U9	286 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RPL24	P83731	157 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RBKS	Q9H477	322 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	C5orf66	Q9H5L9	145 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IL19	Q9UHD0	177 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454		J3QW42	95 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	MEOX2	P50222	304 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RIG	Q13278	110 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	UFC1	Q9Y3C8	167 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SHISA3	A0PJX4	238 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	LNP1	A1A4G5	178 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	TBX6	O95947	436 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ZNF883	P0CG24	379 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	PRO1933	Q9H354	126 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	LYRM2	Q9NU23	88 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IDI2-AS1	Q9NZ38	188 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	MPDZ	O75970	2070 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FGFRL1	Q8N441	504 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	MPDU1	O75352	247 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HYPM	O75409	117 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	STAG3L2	P0CL84	134 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	MUC1	P15941	1255 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RPL30	P62888	115 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SLC16A13	Q7RTY0	426 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FUT9	Q9Y231	359 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IFNL4	K9M1U5	179 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454		M0R2Z0	102 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ORM1	P02763	201 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RSG1	Q9BU20	258 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	PAXX	Q9BUH6	204 aa		11.42	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IGHV3-72	A0A0B4J1Y9	119 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	OVCH2	Q7RTZ1	564 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SFXN3	Q9BWM7	321 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	NPBWR2	P48146	333 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	PLAUR	Q03405	335 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	LDLRAD3	Q86YD5	345 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ZNF738	Q8NE65	137 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	AQP10	Q96PS8	301 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SMPD2	O60906	423 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	LINC00114	Q6XXX2	140 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	LRRC75A	Q8NAA5	344 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	JPT1	Q9UK76	154 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	WASHC3	Q9Y3C0	194 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HIST1H1E	P10412	219 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SHISA5	Q8N114	240 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	NDUFA2	O43678	99 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CYB5R3	P00387	301 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SUCLG1	P53597	346 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	H2BFS	P57053	126 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	C16orf82	Q7Z2V1	217 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SOST	Q9BQB4	213 aa		11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	TRIP12	Q14669	1992 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SIPA1L1	O43166	1804 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ADIPOQ	Q15848	244 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HIST3H3	Q16695	136 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FAM216A	Q8WUB2	273 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	STARD4	Q96DR4	205 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SIGLEC12	Q96PQ1	595 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	POLR2A	P24928	1970 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CEACAM18	A8MTB9	384 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	FAM90A26	D6RGX4	464 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	CYB561D1	Q8N8Q1	229 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	HILPDA	Q9Y5L2	63 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	SCN10A	Q9Y5Y9	1956 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	GTF3C1	Q12789	2109 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IGKV1D-43	A0A0B4J1Z2	117 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	UNC119	Q13432	240 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	OR5P3	Q8WZ94	311 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	P2RX4	Q99571	388 aa		11.4	□□□□□ -0.58
CACNA1C-222	ENST00000406454	IER3	P46695	156 aa		11.4	□□□□□ -0.59
CACNA1C-222	ENST00000406454	RPL8	P62917	257 aa	Known RBP	11.4	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MMD2	Q8IY49	270 aa		11.4	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PACRG	Q96M98	296 aa	Predicted RBP	11.4	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms