RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 hCG_1809904A0A1W2PP81 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PPE2 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PR64 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PRV1 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 H0Y980 276 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TOR1AO14656 332 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAB29O14966 203 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAMP3O60896 148 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 GIPP09681 153 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 SAA2P0DJI9 122 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 REG1BP48304 166 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 DLX6P56179 175 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RND3P61587 244 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RPL30P62888 115 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 ZNF816Q0VGE8 651 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 GGNBP1Q5YKI7 109 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 GSG1LQ6UXU4 331 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 FOXRED2Q8IWF2 684 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TCTE3Q8IZS6 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SLC35G3Q8N808 338 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 C10orf105Q8TEF2 133 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 PPP1R14BQ96C90 147 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 MSI2Q96DH6 328 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 OR10C1Q96KK4 312 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TOLLIPQ9H0E2 274 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LINC00574Q9H8X3 128 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 MMP26Q9NRE1 261 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LIN7CQ9NUP9 197 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 PIPOXQ9P0Z9 390 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SONP18583 2426 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PRD5 423 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PRF3 423 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PRM7 423 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 DBX1A6NMT0 343 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LINC00473A8K010 186 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RNF212BA8MTL3 300 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SCGB1D2O95969 90 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 EPHA1P21709 976 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 DNASE1P24855 282 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 AKR1C2P52895 323 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAP2BP61225 183 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LMO4P61968 165 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 CATR1Q13166 79 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 CLEC12BQ2HXU8 276 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IAH1Q2TAA2 248 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 C1orf229Q6ZS94 237 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 NOXA1Q86UR1 476 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SPAG16Q8N0X2 631 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 C11orf42Q8N5U0 333 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SVIPQ8NHG7 77 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 GRPEL2Q8TAA5 225 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 PPP1R1CQ8WVI7 109 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TMEM133Q9H2Q1 129 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAB18Q9NP72 206 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ITPR3Q14573 2671 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 MYO9AB2RTY4 2548 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 ABCA2Q9BZC7 2435 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 A0A0B4J2A0 478 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 C17orf98A8MV24 154 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 F5H0A9 414 aaPredicted RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 J3QR06 171 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 FCGR3BO75015 233 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 PROP1O75360 226 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 OR2A4O95047 310 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 NXPH3O95157 252 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 CDS2O95674 445 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 KRASP01116 189 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 LPAR6P43657 344 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 S100A10P60903 97 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 SRPXP78539 464 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 IZUMO4Q1ZYL8 232 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 NCR3LG1Q68D85 454 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 SLC25A48Q6ZT89 311 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 SELENOHQ8IZQ5 122 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 PNKDQ8N490 385 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 ZBTB34Q8NCN2 500 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 ZNF439Q8NDP4 499 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 OR10A7Q8NGE5 316 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 OR2A7Q96R45 310 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 S1PR3Q99500 378 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 HSD17B10Q99714 261 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 PCGF1Q9BSM1 259 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 GSX2Q9BZM3 304 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 RANBP3Q9H6Z4 567 aaPredicted RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 COMMD9Q9P000 198 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 SHPKQ9UHJ6 478 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 SESN1Q9Y6P5 492 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 FLNAP21333 2647 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 ZNF469Q96JG9 3925 aaPredicted RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 FXYD6-FXYD2A0A087WZ82 144 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 IGHV2-26A0A0B4J1V2 119 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 FAM157AC9JC47 383 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 NDUFS8O00217 210 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 ENSAO43768 121 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 C1QBP02746 253 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 UCP1P25874 307 aa3.03□□□□□ -1.92
RTN4-208ENST00000404909 DUTP33316 252 aaKnown RBP3.03□□□□□ -1.92
RTN4-208ENST00000404909 DIAPH2-AS1Q14236 149 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms