RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 ZG16O60844 167 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 RPL23AP62750 156 aaKnown RBP11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 TCF15Q12870 199 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 NINJ1Q92982 152 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 OR4C12Q96R67 309 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
TNRC6B-203ENST00000402203 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 ATP5SQ99766 215 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 RBKSQ9H477 322 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 MBNL3Q9NUK0 354 aaKnown RBP11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 RALYQ9UKM9 306 aaKnown RBP11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 PRDX2P32119 198 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 IGKV1D-17A0A075B6S4 117 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 TRBV6-6A0A0A6YYG2 114 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 CLEC18AA5D8T8 446 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 COX5AP20674 150 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 SULT1A1P50225 295 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 HMGN3Q15651 99 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 NCR3LG1Q68D85 454 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 CLEC18CQ8NCF0 446 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 SLC35B3Q9H1N7 401 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 GNG12Q9UBI6 72 aa11.12□□□□□ -0.63
TNRC6B-203ENST00000402203 UBE2KP61086 200 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 C1orf229Q6ZS94 237 aaPredicted RBP11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 PLSCR4Q9NRQ2 329 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 A0A1B0GU03 582 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 ODAMA1E959 279 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 PROP1O75360 226 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 CYB5R3P00387 301 aaPredicted RBP11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 CGAP01215 116 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 IFNA5P01569 189 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 ZNF134P52741 427 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 SRSF7Q16629 238 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 Q8IYB0 196 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 GATAD1Q8WUU5 269 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
TNRC6B-203ENST00000402203 NUDT19A8MXV4 375 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 SLC31A2O15432 143 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 MYOD1P15172 320 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 SCGB1C1Q8TD33 95 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 NDRG3Q9UGV2 375 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 FCGR3BO75015 233 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 OPN1MWP04001 364 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 OPN1MW2P0DN77 364 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 OPN1MW3P0DN78 364 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 AVPI1Q5T686 147 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 SLC25A15Q9Y619 301 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 KPTNQ9Y664 436 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 TRAV3A0A0B4J244 114 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 MDKP21741 143 aaPredicted RBP11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 MDH2P40926 338 aaKnown RBP11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 RAB13P51153 203 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 RAB2AP61019 212 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 RAB11AP62491 216 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 CLEC12BQ2HXU8 276 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 IGFL2Q6UWQ7 119 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 HES4Q9HCC6 221 aa11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
TNRC6B-203ENST00000402203 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 TAS2R30P59541 319 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 ICAM4Q14773 271 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 CISD2Q8N5K1 135 aaKnown RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 ZNF525Q8N782 197 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 SMCO4Q9NRQ5 59 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 TFF3Q07654 80 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 HABP2Q14520 560 aaPredicted RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 ZNF645Q8N7E2 425 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 RBMXL3Q8N7X1 1067 aaKnown RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 STRAPQ9Y3F4 350 aaKnown RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 OOEPA6NGQ2 149 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 H3BQ15 152 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 CCL8P80075 99 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 GCSAMLQ5JQS6 135 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 RBMS3Q6XE24 437 aaKnown RBP11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
TNRC6B-203ENST00000402203 CEBPZOSA8MTT3 80 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 EIF2S3P41091 472 aaKnown RBP11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 GNG10P50151 68 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 SMIM21Q3B7S5 101 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 PRSS33Q8NF86 280 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 PBDC1Q9BVG4 233 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 PRELID3BQ9Y3B1 194 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 TNFRSF9Q07011 255 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
TNRC6B-203ENST00000402203 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms