RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 VHLLQ6RSH7 139 aa13.11□□□□□ -0.31
CDC42-203ENST00000400259 HSD17B10Q99714 261 aaKnown RBP13.11□□□□□ -0.31
CDC42-203ENST00000400259 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
CDC42-203ENST00000400259 ZNF835Q9Y2P0 537 aa13.11□□□□□ -0.31
CDC42-203ENST00000400259 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
CDC42-203ENST00000400259 FOXC1Q12948 553 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 PEA15Q15121 130 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
CDC42-203ENST00000400259 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 PSENENQ9NZ42 101 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 IL19Q9UHD0 177 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 LAMP3Q9UQV4 416 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
CDC42-203ENST00000400259 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 CLDN1O95832 211 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 GUK1Q16774 197 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 DHRS7BQ6IAN0 325 aaPredicted RBP13.1□□□□□ -0.31
CDC42-203ENST00000400259 DPPA3Q6W0C5 159 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
CDC42-203ENST00000400259 KCNJ16Q9NPI9 418 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 JKAMPQ9P055 326 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 HSPB7Q9UBY9 170 aa13.1□□□□□ -0.31
CDC42-203ENST00000400259 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 C17orf98A8MV24 154 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 H3BP45 60 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 K7ENP7 123 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 F2RL2O00254 374 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 CLDN14O95500 239 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 RAB13P51153 203 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 TMEM267Q0VDI3 215 aaPredicted RBP13.09□□□□□ -0.31
CDC42-203ENST00000400259 TBR1Q16650 682 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 SP5Q6BEB4 398 aaPredicted RBP13.09□□□□□ -0.31
CDC42-203ENST00000400259 SSX8Q7RTT4 187 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 CISD2Q8N5K1 135 aaKnown RBP13.09□□□□□ -0.31
CDC42-203ENST00000400259 RFESDQ8TAC1 157 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 Q8TCH9 128 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 KPTNQ9Y664 436 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 MGAQ8IWI9 3026 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 ACACAQ13085 2346 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 IGHV3-43A0A0B4J1X8 118 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 A0A1B0GV50 99 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 BTBD17A6NE02 478 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 C16orf97H3BN30 126 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 YPEL1O60688 119 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 IGHV3-43DP0DP04 118 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 TNFRSF9Q07011 255 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 HFEQ30201 348 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 TMEM108Q6UXF1 575 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 C14orf79Q96F83 325 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 YPEL2Q96QA6 119 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 RNF7Q9UBF6 113 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 DYSFO75923 2080 aa13.09□□□□□ -0.31
CDC42-203ENST00000400259 S1PR2O95136 353 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 IFNA5P01569 189 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 H2AFB1P0C5Y9 115 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 IAPPP10997 89 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 UBE2KP61086 200 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 MORN2Q502X0 79 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 ZNF561Q8N587 486 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 SDSLQ96GA7 329 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 RBM14Q96PK6 669 aaKnown RBP13.08□□□□□ -0.32
CDC42-203ENST00000400259 ABHD14AQ9BUJ0 271 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 PBDC1Q9BVG4 233 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.32
CDC42-203ENST00000400259 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 APC2O95996 2303 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 RAB29O14966 203 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 CGB3P0DN86 165 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 CGB7P0DN87 165 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 PTAFRP25105 342 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 G6PCP35575 357 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 LOXL3P58215 753 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 HBG1P69891 147 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 HBG2P69892 147 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
CDC42-203ENST00000400259 RUNX1Q01196 453 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 ZNF816Q0VGE8 651 aaPredicted RBP13.08□□□□□ -0.32
CDC42-203ENST00000400259 BTNL3Q6UXE8 466 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 GFRALQ6UXV0 394 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 HAPLN4Q86UW8 402 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 ZNF525Q8N782 197 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 ZNRF1Q8ND25 227 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 CD300LFQ8TDQ1 290 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 SCNM1Q9BWG6 230 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 NDRG3Q9UGV2 375 aa13.08□□□□□ -0.32
CDC42-203ENST00000400259 HCFC1P51610 2035 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 LINC00473A8K010 186 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms