RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 OR4C45A6NMZ5 311 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 ADRB1P08588 477 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 SPCS3P61009 180 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 MUC21Q5SSG8 566 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 PRSS27Q9BQR3 290 aa11.82□□□□□ -0.52
CACNA1C-211ENST00000399617 Q6ZN92 141 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 LHFPL6Q9Y693 200 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 HPRT1P00492 218 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 CST4P01036 141 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 MEGF10Q96KG7 1140 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 DMRTA2Q96SC8 542 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 PHOX2AO14813 284 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 FGF12P61328 243 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 Q6ZT83 130 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 ST6GALNAC2Q9UJ37 374 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 OGG1O15527 345 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 KHDC3LQ587J8 217 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 EEF1AKMT3Q96AZ1 226 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 GCSHP23434 173 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 MFAP4P55083 255 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 ZP4Q12836 540 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 NEU1Q99519 415 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 M0R2Z0 102 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 CSRP1P21291 193 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 ABLIM2Q6H8Q1 611 aa11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 CHCHD2Q9Y6H1 151 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-211ENST00000399617 LINC00869P0C866 280 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 IL13RA2Q14627 380 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 PRSS8Q16651 343 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF837Q96EG3 531 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 Q9N2K0 584 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 SIRT4Q9Y6E7 314 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 RIPPLY3P57055 190 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 TRAV20A0A0B4J274 112 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 ANKRD20A5PA0PJZ0 165 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 FOXF2Q12947 444 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF56Q15929 161 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 OR4C13Q8NGP0 309 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 WDYHV1Q96HA8 205 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 CD69Q07108 199 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 RNASE6Q93091 150 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 RBKSQ9H477 322 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 RUNX1Q01196 453 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 EWSR1Q01844 656 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 DNAJC13O75165 2243 aa11.8□□□□□ -0.52
CACNA1C-211ENST00000399617 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 TMEM189A5PLL7 270 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 SSBP1Q04837 148 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 FAM53AQ6NSI3 398 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 UBE2DNLQ8IWF7 75 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 TMEM219Q86XT9 240 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 CCL3L1P16619 93 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 H3BVH4 76 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 PTP4A3O75365 173 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 MBPP02686 304 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 INHBBP09529 407 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 COL5A3P25940 1745 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 LY6HO94772 140 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 OR2A4O95047 310 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 HERPUD1Q15011 391 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 OR2A7Q96R45 310 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 IGHV2OR16-5A0A0B4J2B6 119 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 HELTA6NFD8 242 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 C5orf52A6NGY3 159 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 MC5RP33032 325 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 RPL29P47914 159 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 CX3CL1P78423 397 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 SP5Q6BEB4 398 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-211ENST00000399617 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 GPR183P32249 361 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 SLC35E3Q7Z769 313 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 OR9G1Q8NH87 305 aa11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-211ENST00000399617 ZNF107Q9UII5 783 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms