RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 GCSAMQ8N6F7 178 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 CLDND2Q8NHS1 167 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 EDARADDQ8WWZ3 215 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 PSG11Q9UQ72 335 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 DEFB108AA8MXU0 73 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 FOLR2P14207 255 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 GZMHP20718 246 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 SERF2P84101 59 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 SLC38A11Q08AI6 406 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 ICAM4Q14773 271 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 Q3ZCU0 254 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 RBMXL3Q8N7X1 1067 aaKnown RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 SNX22Q96L94 193 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 AGMATQ9BSE5 352 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 DCTN5Q9BTE1 182 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 SFXN3Q9BWM7 321 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
PRAME-202ENST00000398743 EGLN1Q9GZT9 426 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 RPRMQ9NS64 109 aa11.55□□□□□ -0.56
PRAME-202ENST00000398743 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRAME-202ENST00000398743 LINC00473A8K010 186 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 MGST3O14880 152 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 RAB29O14966 203 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 KLK10O43240 276 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 SRP19P09132 144 aaKnown RBP11.54□□□□□ -0.56
PRAME-202ENST00000398743 NKX6-1P78426 367 aaPredicted RBP11.54□□□□□ -0.56
PRAME-202ENST00000398743 VHLLQ6RSH7 139 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 PRSS33Q8NF86 280 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 MEGF10Q96KG7 1140 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 SEBOXQ9HB31 216 aaPredicted RBP11.54□□□□□ -0.56
PRAME-202ENST00000398743 TM4SF5O14894 197 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 MT-ND4LP03901 98 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 DAOP14920 347 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 LTC4SQ16873 150 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 OR8G2PQ6IF36 304 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 MOGAT3Q86VF5 341 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 OR4C12Q96R67 309 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 JPT1Q9UK76 154 aa11.54□□□□□ -0.56
PRAME-202ENST00000398743 IGHV3OR15-7A0A075B7D8 119 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 SPRY3O43610 288 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 GPR12P47775 334 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 CEBPGP53567 150 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRAME-202ENST00000398743 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 CLN8Q9UBY8 286 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 KLF2Q9Y5W3 355 aaPredicted RBP11.53□□□□□ -0.56
PRAME-202ENST00000398743 INTS1Q8N201 2190 aaKnown RBP11.53□□□□□ -0.56
PRAME-202ENST00000398743 ZNF292O60281 2723 aa11.53□□□□□ -0.56
PRAME-202ENST00000398743 IGLV3-9A0A075B6K5 115 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 MARCH11A6NNE9 402 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 K7EM74 188 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.56
PRAME-202ENST00000398743 RAB5BP61020 215 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 CR1LQ2VPA4 569 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 RNF212Q495C1 297 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 KRTCAP3Q53RY4 240 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.56
PRAME-202ENST00000398743 GTF3C1Q12789 2109 aa11.52□□□□□ -0.56
PRAME-202ENST00000398743 CEACAM8P31997 349 aaPredicted RBP11.52□□□□□ -0.57
PRAME-202ENST00000398743 RPS23P62266 143 aaKnown RBP11.52□□□□□ -0.57
PRAME-202ENST00000398743 MORN2Q502X0 79 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 SPRNQ5BIV9 151 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 ZNF787Q6DD87 383 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 ZFP82Q8N141 532 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 FAM57AQ8TBR7 257 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 MBD3L1Q8WWY6 194 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.57
PRAME-202ENST00000398743 GNG13Q9P2W3 67 aa11.52□□□□□ -0.57
PRAME-202ENST00000398743 LOC102723971A0A1B0GUV8 181 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 A0A1W2PPH5 198 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 H3BQ15 152 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 YPEL1O60688 119 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 ZG16O60844 167 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 LHBP01229 141 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 PTAFRP25105 342 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
PRAME-202ENST00000398743 EDDM3BP56851 147 aa11.51□□□□□ -0.57
PRAME-202ENST00000398743 LINC00205P59089 165 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms