RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 RNF5Q99942 180 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PMCHL2Q9BQD1 86 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 NEURL2Q9BR09 285 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 BEX1Q9HBH7 125 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FAM206AQ9NX38 181 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FLVCR2Q9UPI3 526 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZNF835Q9Y2P0 537 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MINOS1-NBL1R4GNA1 71 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 RER1O15258 196 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SPINT1O43278 529 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 RHBDL1O75783 438 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LEPP41159 167 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MAGEA5P43359 124 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 RPS10P46783 165 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 P2RY1P47900 373 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PCBP3P57721 371 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 RSPO4Q2I0M5 234 aaPredicted RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 MAJINQ3KP22 176 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PHLDA2Q53GA4 152 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 AUNIPQ9H7T9 357 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZDHHC11Q9H8X9 412 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 NAT8BQ9UHF3 227 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 TMEM202A6NGA9 273 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MARCH11A6NNE9 402 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 M0R1W7 72 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 CXCL13O43927 109 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SELENOFO60613 162 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 IGHA1P01876 353 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 IGHA2P01877 340 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PLNP26678 52 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 OR3A4PP47883 348 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 HIST1H1AQ02539 215 aaPredicted RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 OPCMLQ14982 345 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 GUSBP11Q6P575 273 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LILRA6Q6PI73 481 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LURAP1Q96LR2 239 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 DNAJB12Q9NXW2 375 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 TAS2R5Q9NYW4 299 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 CHST2Q9Y4C5 530 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ARL2-SNX15V9GYD0 113 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MED13LQ71F56 2210 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 CACNA1HO95180 2353 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 A0A1W2PR48 441 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PRR19A6NJB7 356 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 GATCO43716 136 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 HSPB1P04792 205 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 MELTFP08582 738 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FCGR2CP31995 323 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 TGFBR1P36897 503 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ACAA2P42765 397 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 PPOXP50336 477 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZNF750Q32MQ0 723 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SPANXN5Q5MJ07 72 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FNDC7Q5VTL7 733 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LCN12Q6JVE5 192 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LRP11Q86VZ4 500 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MISP3Q96FF7 219 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SPXQ9BT56 116 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FGF20Q9NP95 211 aaPredicted RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 OR51B2Q9Y5P1 312 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 R4GN57 208 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZAR1LA6NP61 321 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 CCL3P10147 92 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 FABP4P15090 132 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 EMDP50402 254 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SRSF9Q13242 221 aaKnown RBP eCLIP2.37□□□□□ -2.03
CHD9-202ENST00000398510 TMEM95Q3KNT9 176 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LHX8Q68G74 356 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 UCN2Q96RP3 112 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PAXXQ9BUH6 204 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MED29Q9NX70 200 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 A0A0B4J2A0 478 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZNF320A2RRD8 509 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 F2Z2F3 143 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZNF705BP0CI00 300 aaPredicted RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 FSTP19883 344 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 GFERP55789 205 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 ZP4Q12836 540 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 OR9G1Q8NH87 305 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 TMEM167AQ8TBQ9 72 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SAP25Q8TEE9 199 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 GTF3AQ92664 365 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 RNASE6Q93091 150 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 WDFY2Q96P53 400 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 AQP10Q96PS8 301 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SOSTQ9BQB4 213 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PLA2G12AQ9BZM1 189 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 LINC00470Q9BZP3 86 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PARP11Q9NR21 331 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 MBNL1Q9NR56 388 aaKnown RBP2.37□□□□□ -2.03
CHD9-202ENST00000398510 SHPKQ9UHJ6 478 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 CSAG2Q9Y5P2 127 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 A0A096LPE4 126 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 TRBV7-1A0A0A6YYK4 115 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 A0A1W2PPZ6 126 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 B4DSR2 109 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SPRY3O43610 288 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 SLC38A11Q08AI6 406 aa2.37□□□□□ -2.03
CHD9-202ENST00000398510 PVRIGQ6DKI7 326 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms