RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 ZNF385CQ66K41 422 aaPredicted RBP14.06□□□□□ -0.16
CTDSP2-201ENST00000398073 COL10A1Q03692 680 aa14.06□□□□□ -0.16
CTDSP2-201ENST00000398073 FAM89BQ8N5H3 189 aa14.06□□□□□ -0.16
CTDSP2-201ENST00000398073 RNF7Q9UBF6 113 aa14.06□□□□□ -0.16
CTDSP2-201ENST00000398073 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 RAB29O14966 203 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 HTR1DP28221 377 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 PRDX2P32119 198 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 UCP2P55851 309 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 C19orf35Q6ZS72 473 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 M0R2Z0 102 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 MGST3O14880 152 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 KBTBD11O94819 623 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 CCL1P22362 96 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 TPRX1Q8N7U7 411 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 WIPI2Q9Y4P8 454 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 PTPRDP23468 1912 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 TRAV38-1A0A0B4J264 116 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 J3QR06 171 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 SLC31A2O15432 143 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 IZUMO4Q1ZYL8 232 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 WDR25Q64LD2 544 aaPredicted RBP14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 PAM16Q9Y3D7 125 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 SYNGR3O43761 229 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 ZNF343Q6P1L6 599 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 C1orf174Q8IYL3 243 aa14.05□□□□□ -0.16
CTDSP2-201ENST00000398073 IGKV1-9A0A0C4DH69 117 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 CLDN14O95500 239 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 MT-ND6P03923 174 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 CLEC3BP05452 202 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 SRP19P09132 144 aaKnown RBP14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 FAM166AQ6J272 317 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 OR1L1Q8NH94 360 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 RPEQ96AT9 228 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 TREM2Q9NZC2 230 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 ZNHIT1O43257 154 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 STXBP6Q8NFX7 210 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 CCL17Q92583 94 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 RALGAPA1Q6GYQ0 2036 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 SRSF3P84103 164 aaKnown RBP14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 HIST3H3Q16695 136 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 VN1R17PQ8TDU5 208 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 SRD5A3Q9H8P0 318 aa14.04□□□□□ -0.16
CTDSP2-201ENST00000398073 LDLRAD4O15165 306 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 TMPRSS2O15393 492 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 ZNF25P17030 456 aaPredicted RBP14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 RCC1LQ96I51 464 aaKnown RBP14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 HARBI1Q96MB7 349 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 RPLP1P05386 114 aaKnown RBP14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 BRS3P32247 399 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 PARLQ9H300 379 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 RSPO4Q2I0M5 234 aaPredicted RBP14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 OR1L8Q8NGR8 309 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 TMEM191AQ9H0A3 160 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 TRBV6-7A0A0A0MS04 114 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 CACNA1DQ01668 2161 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 RHOVQ96L33 236 aa14.03□□□□□ -0.16
CTDSP2-201ENST00000398073 ZDBF2Q9HCK1 2354 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 ABCA7Q8IZY2 2146 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 FADS6Q8N9I5 356 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 IGLV3-12A0A075B6K2 115 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 A0A087WWC5 75 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 TRBV23-1A0A0A0MS06 115 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 AGAP20933 346 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 SPNS3Q6ZMD2 512 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 GSN-AS1Q9NRJ2 163 aa14.02□□□□□ -0.16
CTDSP2-201ENST00000398073 SCN5AQ14524 2016 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 PTTG1IPP53801 180 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 STARD6P59095 220 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 NHLRC2Q8NBF2 726 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 OR1B1Q8NGR6 318 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 LINC00470Q9BZP3 86 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 NAGKQ9UJ70 344 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 HIST1H1EP10412 219 aaKnown RBP14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 CTSSP25774 331 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 FAM214BQ7L5A3 538 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 CALHM1Q8IU99 346 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 DRAM1Q8N682 238 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 OR10S1Q8NGN2 331 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 OR4X1Q8NH49 305 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 OR2V2Q96R30 315 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 TIMP4Q99727 224 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 GDF15Q99988 308 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 ABHD14AQ9BUJ0 271 aa14.02□□□□□ -0.17
CTDSP2-201ENST00000398073 CASP8AP2Q9UKL3 1982 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 FCER1GP30273 86 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 PRRX1P54821 245 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 FLYWCH2Q96CP2 140 aaKnown RBP14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 ZG16O60844 167 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 C10orf113Q5VZT2 155 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 WDFY1Q8IWB7 410 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 OR51B2Q9Y5P1 312 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 GFRALQ6UXV0 394 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 MARCH11A6NNE9 402 aa14.01□□□□□ -0.17
CTDSP2-201ENST00000398073 DIRC3C9JPN6 131 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms