RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 IGHV1-3A0A0C4DH29 117 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 CTDSP2O14595 271 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 CA11O75493 328 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 LY86O95711 162 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 FRMD6-AS1P0C7T7 363 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 REG1BP48304 166 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 LTC4SQ16873 150 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 CNPY1Q3B7I2 92 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 MOGAT2Q3SYC2 334 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 C6orf201Q7Z4U5 140 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 OR11H1Q8NG94 326 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 FAAP24Q9BTP7 215 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 PECRQ9BY49 303 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 PALMDQ9NP74 551 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
CUX2-202ENST00000397643 MEIKINA0A087WXM9 373 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 A0A1W2PPE3 182 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 UBE2QL1A1L167 161 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 NCBP2LA6PVI3 153 aaKnown RBP12.52□□□□□ -0.41
CUX2-202ENST00000397643 EIF4EP06730 217 aaKnown RBP12.52□□□□□ -0.41
CUX2-202ENST00000397643 HIST1H1DP16402 221 aaKnown RBP12.52□□□□□ -0.41
CUX2-202ENST00000397643 ELK1P19419 428 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 SSTR5P35346 364 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 TALDO1P37837 337 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 INSL3P51460 131 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 PAX5Q02548 391 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 KIAA0141Q14154 515 aaPredicted RBP12.52□□□□□ -0.41
CUX2-202ENST00000397643 CDNFQ49AH0 187 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 PLAC9Q5JTB6 97 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 RSBN1Q5VWQ0 802 aaPredicted RBP12.52□□□□□ -0.41
CUX2-202ENST00000397643 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 MRGPRDQ8TDS7 321 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 SULT4A1Q9BR01 284 aa12.52□□□□□ -0.41
CUX2-202ENST00000397643 TRAV18A0A075B6X5 111 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 TMEM30CPA0ZSE6 113 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 XRCC3O43542 346 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 GNB3P16520 340 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 S100A5P33763 92 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 MRPS15P82914 257 aaKnown RBP12.51□□□□□ -0.41
CUX2-202ENST00000397643 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 PLPPR1Q8TBJ4 325 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 RBMXL1Q96E39 390 aaKnown RBP12.51□□□□□ -0.41
CUX2-202ENST00000397643 S1PR3Q99500 378 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 GNB4Q9HAV0 340 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
CUX2-202ENST00000397643 I3L521 148 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 MFNGO00587 321 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 GAPDHP04406 335 aaKnown RBP12.5□□□□□ -0.41
CUX2-202ENST00000397643 IGF1P05019 195 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 GSTP1P09211 210 aaKnown RBP12.5□□□□□ -0.41
CUX2-202ENST00000397643 CD3GP09693 182 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 ZNF497Q6ZNH5 498 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 LAX1Q8IWV1 398 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 OR10A7Q8NGE5 316 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 RIMS4Q9H426 269 aaPredicted RBP12.5□□□□□ -0.41
CUX2-202ENST00000397643 EDA2RQ9HAV5 297 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
CUX2-202ENST00000397643 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
CUX2-202ENST00000397643 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
CUX2-202ENST00000397643 MT-ND4P03905 459 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 VDAC1P21796 283 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 TAS2R20P59543 309 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 GNB1P62873 340 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 RUNX1Q01196 453 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 ARFRP1Q13795 201 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
CUX2-202ENST00000397643 DIRAS2Q96HU8 199 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
CUX2-202ENST00000397643 TM2D3Q9BRN9 247 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 AUNIPQ9H7T9 357 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 TRAPPC2LQ9UL33 140 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 MRPS7Q9Y2R9 242 aaKnown RBP12.49□□□□□ -0.41
CUX2-202ENST00000397643 KCNK7Q9Y2U2 307 aa12.49□□□□□ -0.41
CUX2-202ENST00000397643 TPPPO94811 219 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 MOSP00540 346 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 SPNP16150 400 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
CUX2-202ENST00000397643 TNFSF8P32971 234 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 GNG2P59768 71 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 PITPNAQ00169 270 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 ZNF429Q86V71 674 aa12.48□□□□□ -0.41
CUX2-202ENST00000397643 GAPTQ8N292 157 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms