RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TNFRSF19Q9NS68 423 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 BOLA1Q9Y3E2 137 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 CADP27708 2225 aa6.95□□□□□ -1.3
PTPRD-204ENST00000397606 CRYM-AS1A6NIL9 109 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 OR5G3P0C626 314 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 ATP6V1FQ16864 119 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 KDF1Q8NAX2 398 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-204ENST00000397606 SCARB1Q8WTV0 552 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 NEUROG1Q92886 237 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 DPM3Q9P2X0 92 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 M0QZ24 198 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 BCL2L11O43521 198 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 TGFAP01135 160 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 SLC38A11Q08AI6 406 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM65Q6PI78 240 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 PCSK4Q6UW60 755 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 COMMD7Q86VX2 200 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 MMP24Q9Y5R2 645 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 J3QR06 171 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 SSX5O60225 188 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 SSX2Q16385 188 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 OR4C13Q8NGP0 309 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 USF3Q68DE3 2245 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 FGF7P21781 194 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 ACSM6Q6P461 480 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 DRAM1Q8N682 238 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 IL22RA2Q969J5 263 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 ARV1Q9H2C2 271 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
PTPRD-204ENST00000397606 F6UZH7 168 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 LDLRAD4O15165 306 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 CHST1O43916 411 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 VSIG10L2P0DP72 767 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM11P17152 192 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 P2RY1P47900 373 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 HTD2P86397 168 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 EFNB3Q15768 340 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 Q56UQ5 140 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 H1FOOQ8IZA3 346 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 LFNGQ8NES3 379 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 DCTN5Q9BTE1 182 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 ACTR3CQ9C0K3 210 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 C5orf66Q9H5L9 145 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 PLAUP00749 431 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 SNRNP70P08621 437 aaKnown RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 METTL15P1P0C7V9 234 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 RAB5CP51148 216 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 SPINK9Q5DT21 86 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 TMEM182Q6ZP80 229 aaPredicted RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 SFT2D1Q8WV19 159 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 TMED6Q8WW62 240 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 AUP1Q9Y679 476 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 TRBV6-7A0A0A0MS04 114 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 UBE2L5PA0A1B0GUS4 154 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 FAM24AA6NFZ4 105 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 RHEBQ15382 184 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF787Q6DD87 383 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF529Q6P280 563 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 SEM1Q6ZVN7 128 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 KCNRGQ8N5I3 272 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 OR5C1Q8NGR4 320 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 OR51B2Q9Y5P1 312 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 POMT1Q9Y6A1 747 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 DOCK10Q96BY6 2186 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 IGLV3-9A0A075B6K5 115 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 HMSDA8MTL9 139 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 YPEL1O60688 119 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 RPL27AP46776 148 aaKnown RBP6.93□□□□□ -1.3
PTPRD-204ENST00000397606 DHRS11Q6UWP2 260 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 YPEL2Q96QA6 119 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 NEURL2Q9BR09 285 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
PTPRD-204ENST00000397606 F8W036 122 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 APOC3P02656 99 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 PRB1P04280 392 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 CCL3L1P16619 93 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 BMI1P35226 326 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 GATA4P43694 442 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 RPL8P62917 257 aaKnown RBP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 ZNF324BQ6AW86 544 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-204ENST00000397606 ASCL4Q6XD76 172 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 FGFRL1Q8N441 504 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 OR10A7Q8NGE5 316 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 CMTM2Q8TAZ6 248 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 GSX2Q9BZM3 304 aa6.92□□□□□ -1.3
PTPRD-204ENST00000397606 METTL1Q9UBP6 276 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms