RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 Q6ZSR3 168 aa8.8□□□□□ -1
CPSF1P1-201ENST00000397477 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
CPSF1P1-201ENST00000397477 TMPRSS5Q9H3S3 457 aa8.8□□□□□ -1
CPSF1P1-201ENST00000397477 ANKRD11Q6UB99 2663 aaPredicted RBP8.8□□□□□ -1
CPSF1P1-201ENST00000397477 A0A1B0GU03 582 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 ZG16O60844 167 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 IGKV1-5P01602 117 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 ID3Q02535 119 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 OR10P1Q8NGE3 313 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 RAB39BQ96DA2 213 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 UNKLQ9H9P5 680 aaKnown RBP8.79□□□□□ -1
CPSF1P1-201ENST00000397477 PGA5P0DJD9 388 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 PRDX2P32119 198 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 RPL30P62888 115 aaKnown RBP8.79□□□□□ -1
CPSF1P1-201ENST00000397477 DLK1P80370 383 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 OR4A16Q8NH70 328 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 HIST1H2BAQ96A08 127 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 ARFGEF3Q5TH69 2177 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 CYB5BO43169 146 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 HBE1P02100 147 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 MMP9P14780 707 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 MDH2P40926 338 aaKnown RBP8.79□□□□□ -1
CPSF1P1-201ENST00000397477 TAS2R30P59541 319 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 ARL16Q0P5N6 197 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 MOB1BQ7L9L4 216 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 OR2V2Q96R30 315 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 TMEM204Q9BSN7 226 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 RBKSQ9H477 322 aa8.79□□□□□ -1
CPSF1P1-201ENST00000397477 CACNA1BQ00975 2339 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 MAP1LC3B2A6NCE7 125 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 ERVK-16P61578 105 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 S100PBPQ96BU1 408 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 MAP1LC3BQ9GZQ8 125 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 NIT2Q9NQR4 276 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 K7N7A8 449 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 IGKV1-39P01597 117 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 IGKV1D-39P04432 117 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 CCL8P80075 99 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 FAM27E3Q08E93 113 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 OR4F5Q8NH21 305 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 OR4F4Q96R69 305 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 ZDHHC11Q9H8X9 412 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 LAMA5O15230 3695 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 OOEPA6NGQ2 149 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 PRR33A8MZF0 331 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 LINC00587B1AMM8 73 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 NKX6-1P78426 367 aaPredicted RBP8.78□□□□□ -1
CPSF1P1-201ENST00000397477 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 RBMS3Q6XE24 437 aaKnown RBP8.78□□□□□ -1
CPSF1P1-201ENST00000397477 PPP1R35Q8TAP8 253 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 DTD1Q8TEA8 209 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 TAAR6Q96RI8 345 aa8.78□□□□□ -1
CPSF1P1-201ENST00000397477 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.78□□□□□ -1
CPSF1P1-201ENST00000397477 RAB5AP20339 215 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 HOXA1P49639 335 aaPredicted RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 FFAR4Q5NUL3 377 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 LINC00596Q86U02 117 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 LYG1Q8N1E2 194 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 ITLN1Q8WWA0 313 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 H1FXQ92522 213 aaKnown RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 TRBV23-1A0A0A0MS06 115 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 A0A1W2PPV4 95 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 SCAF4O95104 1147 aaKnown RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 EGR1P18146 543 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 CD200P41217 278 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 WDR82Q6UXN9 313 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 COMMD1Q8N668 190 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 ENY2Q9NPA8 101 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 IGHV2OR16-5A0A0B4J2B6 119 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 ODAMA1E959 279 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 IFNA1P01562 189 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 IRF2P14316 349 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 PAX9P55771 341 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 PDLIM3Q53GG5 364 aaPredicted RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF880Q6PDB4 577 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 CISD2Q8N5K1 135 aaKnown RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 SMIM7Q9BQ49 75 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 PATZ1Q9HBE1 687 aaKnown RBP8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 WIPI2Q9Y4P8 454 aa8.77□□□□□ -1.01
CPSF1P1-201ENST00000397477 COLCA2A8K830 154 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 SS18L1O75177 396 aaPredicted RBP8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 CYB5R3P00387 301 aaPredicted RBP8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ACSF3Q4G176 576 aaPredicted RBP8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF585BQ52M93 769 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 R3HDM4Q96D70 268 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF737O75373 536 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 YIF1AO95070 293 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 CLDN14O95500 239 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 KLF3P57682 345 aaPredicted RBP8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ERVFRD-1P60508 538 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 Q6ZR03 302 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 ZNF561Q8N587 486 aa8.76□□□□□ -1.01
CPSF1P1-201ENST00000397477 CCL13Q99616 98 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms