RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
SEC13-206ENST00000397102 Q96M66 194 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 TINAGL1Q9GZM7 467 aaPredicted RBP11.28□□□□□ -0.6
SEC13-206ENST00000397102 BANF2Q9H503 90 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 AASSQ9UDR5 926 aa11.28□□□□□ -0.6
SEC13-206ENST00000397102 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.6
SEC13-206ENST00000397102 PDCD6O75340 191 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 CPEP16870 476 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 GABRB1P18505 474 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 DEFA5Q01523 94 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 AWAT2Q6E213 333 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 SNAPC3Q92966 411 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 OVOL2Q9BRP0 275 aa11.27□□□□□ -0.61
SEC13-206ENST00000397102 A0A0B4J203 849 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 SAC3D1A6NKF1 404 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 ITGB1BP1O14713 200 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 BAG2O95816 211 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 LGALS7P47929 136 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
SEC13-206ENST00000397102 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
SEC13-206ENST00000397102 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
SEC13-206ENST00000397102 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 ABHD14BQ96IU4 210 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 AMBNQ9NP70 447 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 CKLFQ9UBR5 152 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 ORC6Q9Y5N6 252 aa11.26□□□□□ -0.61
SEC13-206ENST00000397102 TRAV8-7A0A075B6U6 113 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 TRBV5-5A0A0J9YX44 114 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 H3BNX3 289 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
SEC13-206ENST00000397102 ALPLP05186 524 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 LIMS3P0CW19 117 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 LIMS4P0CW20 117 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 CAPGP40121 348 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 PDPNQ86YL7 162 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
SEC13-206ENST00000397102 Q96MT0 163 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 PARP12Q9H0J9 701 aaKnown RBP11.25□□□□□ -0.61
SEC13-206ENST00000397102 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
SEC13-206ENST00000397102 MRPS18AQ9NVS2 196 aaKnown RBP11.25□□□□□ -0.61
SEC13-206ENST00000397102 KIAA1109Q2LD37 5005 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 GUCA2BQ16661 112 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 ZIK1Q3SY52 487 aaPredicted RBP11.24□□□□□ -0.61
SEC13-206ENST00000397102 CDH26Q8IXH8 852 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 DRAXINQ8NBI3 349 aaPredicted RBP11.24□□□□□ -0.61
SEC13-206ENST00000397102 GATAD1Q8WUU5 269 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 SMIM19Q96E16 107 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
SEC13-206ENST00000397102 HECTD4Q9Y4D8 3996 aa11.24□□□□□ -0.61
SEC13-206ENST00000397102 BMPR1BO00238 502 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 OGG1O15527 345 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 PROP1O75360 226 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 DEDDO75618 318 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 NDUFB8O95169 186 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 APOA2P02652 100 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 Q499Y3 187 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 ZNF383Q8NA42 475 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 EDARADDQ8WWZ3 215 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
SEC13-206ENST00000397102 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
SEC13-206ENST00000397102 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 EI24O14681 340 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 RBMXL2O75526 392 aaKnown RBP11.22□□□□□ -0.61
SEC13-206ENST00000397102 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
SEC13-206ENST00000397102 TNFRSF9Q07011 255 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 PJVKQ0ZLH3 352 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 SLC16A13Q7RTY0 426 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 RHOXF1Q8NHV9 184 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 WDR89Q96FK6 387 aaPredicted RBP11.22□□□□□ -0.61
SEC13-206ENST00000397102 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
SEC13-206ENST00000397102 C11orf54Q9H0W9 315 aaPredicted RBP11.22□□□□□ -0.61
SEC13-206ENST00000397102 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
SEC13-206ENST00000397102 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.61
SEC13-206ENST00000397102 NAPSAO96009 420 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 IGLV2-23P01705 113 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 CRYGBP07316 175 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 LINC00205P59089 165 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 RPS11P62280 158 aaKnown RBP eCLIP11.21□□□□□ -0.61
SEC13-206ENST00000397102 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.61
SEC13-206ENST00000397102 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.61
SEC13-206ENST00000397102 OR2G6Q5TZ20 316 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms