RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TUBA4BQ9H853 241 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 SIGLEC8Q9NYZ4 499 aa13.41□□□□□ -0.26
EXOSC3-202ENST00000396521 H0YJW9 148 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 FCN1O00602 326 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 BRI3O95415 125 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 HSPA13P48723 471 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 MOB1BQ7L9L4 216 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 C8orf59Q8N0T1 100 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 OR13C5Q8NGS8 318 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 IL1F10Q8WWZ1 152 aa13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 METTL1Q9UBP6 276 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-202ENST00000396521 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.27
EXOSC3-202ENST00000396521 AADACP22760 399 aa13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 MAPK3P27361 379 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 ADAMTSL5Q6ZMM2 481 aa13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 POC5Q8NA72 575 aa13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 PGLYRP3Q96LB9 341 aa13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
EXOSC3-202ENST00000396521 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 WBP4O75554 376 aaKnown RBP13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 CD1AP06126 327 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 PSG5Q15238 335 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 Q8N402 240 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 OR2K2Q8NGT1 345 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 TMEM80Q96HE8 168 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 AGMATQ9BSE5 352 aa13.38□□□□□ -0.27
EXOSC3-202ENST00000396521 NAPSAO96009 420 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 LALBAP00709 142 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 CPEP16870 476 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 ZBTB25P24278 435 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 FXYD3Q14802 87 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 SMN1Q16637 294 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 RPL39P5Q59GN2 51 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 ZNF880Q6PDB4 577 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 SVOPQ8N4V2 548 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 DERL3Q96Q80 235 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 FAM103A1Q9BTL3 118 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 ZNF355PQ9NSJ1 428 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 GAB2Q9UQC2 676 aa13.37□□□□□ -0.27
EXOSC3-202ENST00000396521 CA2P00918 260 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 PDPNQ86YL7 162 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 ZNF485Q8NCK3 441 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 KCNG3Q8TAE7 436 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 FAM46BQ96A09 425 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 PTX4Q96A99 478 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 USMG5Q96IX5 58 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 SULT4A1Q9BR01 284 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 FAAP24Q9BTP7 215 aa13.36□□□□□ -0.27
EXOSC3-202ENST00000396521 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 TNCP24821 2201 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 TRBV6-6A0A0A6YYG2 114 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 A0A1W2PPK0 400 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 AIREO43918 545 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 CNIH1O95406 144 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 APOA2P02652 100 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 GNAO1P09471 354 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 LGALS7P47929 136 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 RPS27AP62979 156 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 ABHD14BQ96IU4 210 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 THAP7Q9BT49 309 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 TMED9Q9BVK6 235 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 TMEM59Q9BXS4 323 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 CHMP1AQ9HD42 196 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 PEF1Q9UBV8 284 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 ZNF221Q9UK13 617 aa13.35□□□□□ -0.27
EXOSC3-202ENST00000396521 OR2A4O95047 310 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 BPNT1O95861 308 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 CEACAM6P40199 344 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 TAGLNQ01995 201 aaKnown RBP13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 ZNF343Q6P1L6 599 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 GLDNQ6ZMI3 551 aaPredicted RBP13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 C6orf201Q7Z4U5 140 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 GRPEL2Q8TAA5 225 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 TM2D1Q9BX74 207 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
EXOSC3-202ENST00000396521 CELP19835 753 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 SYNJ2BPP57105 145 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 GLT8D1Q68CQ7 371 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 OR5T1Q8NG75 326 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 SNAPC3Q92966 411 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 TINAGL1Q9GZM7 467 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 C11orf54Q9H0W9 315 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 Q9H521 79 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 CEPT1Q9Y6K0 416 aa13.33□□□□□ -0.28
EXOSC3-202ENST00000396521 A0A0B4J203 849 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms