RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 REV3LO60673 3130 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 B4DEV8 164 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 C16orf97H3BN30 126 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 NAPSAO96009 420 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 G0S2P27469 103 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 TAS2R45P59539 299 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 FABP9Q0Z7S8 132 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 USF2Q15853 346 aaPredicted RBP5.57□□□□□ -1.52
BDNF-203ENST00000395978 SRSF7Q16629 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
BDNF-203ENST00000395978 TMEM41BQ5BJD5 291 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 CYB561D1Q8N8Q1 229 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 CCL17Q92583 94 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 SNX22Q96L94 193 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
BDNF-203ENST00000395978 GAL3ST2Q9H3Q3 398 aa5.57□□□□□ -1.52
BDNF-203ENST00000395978 ZNF71Q9NQZ8 489 aaPredicted RBP5.57□□□□□ -1.52
BDNF-203ENST00000395978 PCNX1Q96RV3 2341 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SPTAN1Q13813 2472 aaKnown RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 TRAV38-1A0A0B4J264 116 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 A0A1W2PPQ1 181 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 IQCF6A8MYZ5 107 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 C12orf77C9JDV5 145 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 PROB1E7EW31 1015 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 F6UZH7 168 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 DNASE2O00115 360 aaPredicted RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 CDX4O14627 284 aaPredicted RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 SS18L1O75177 396 aaPredicted RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 CLDN14O95500 239 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 IL18BPO95998 194 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 HSPB1P04792 205 aaKnown RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 PGA5P0DJD9 388 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 TNFRSF9Q07011 255 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 CLEC12BQ2HXU8 276 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 C4orf17Q53FE4 359 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 KRTCAP3Q53RY4 240 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 DHRS7BQ6IAN0 325 aaPredicted RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 ZNF600Q6ZNG1 722 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 GLRX5Q86SX6 157 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 MDS2Q8NDY4 140 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 NEIL1Q96FI4 390 aaPredicted RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 FAM210BQ96KR6 192 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 ZNF665Q9H7R5 613 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 PKDREJQ9NTG1 2253 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 TREM2Q9NZC2 230 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 ZNF318Q5VUA4 2279 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 IFNL4K9M1U5 179 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 TMPRSS2O15393 492 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SOX15O60248 233 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 OR7C2O60412 319 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 HPRT1P00492 218 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 BCL2P10415 239 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 PF4V1P10720 104 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 ID3Q02535 119 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 TLE1Q04724 770 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 ITLN1Q8WWA0 313 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 TAF15Q92804 592 aaKnown RBP eCLIP5.56□□□□□ -1.52
BDNF-203ENST00000395978 CHD7Q9P2D1 2997 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 ATG2AQ2TAZ0 1938 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 PCNX3Q9H6A9 2034 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 THBS3P49746 956 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 BSXQ3C1V8 233 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SLC35E3Q7Z769 313 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 C9orf106Q8NAJ2 232 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 Q8NFD4 153 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 PLPPR1Q8TBJ4 325 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 RBKSQ9H477 322 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SIRT7Q9NRC8 400 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SLC35D1Q9NTN3 355 aa5.56□□□□□ -1.52
BDNF-203ENST00000395978 SPTBN1Q01082 2364 aaKnown RBP5.56□□□□□ -1.52
BDNF-203ENST00000395978 SPTBN5Q9NRC6 3674 aaKnown RBP5.55□□□□□ -1.52
BDNF-203ENST00000395978 RAB29O14966 203 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 SCGB2A1O75556 95 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 LYL1P12980 280 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 CTRB1P17538 263 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 PDZD11Q5EBL8 140 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 CTRB2Q6GPI1 263 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 ACP7Q6ZNF0 438 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 OR4D5Q8NGN0 318 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 RARRES2Q99969 163 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 MANBALQ9NQG1 85 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 GAR1Q9NY12 217 aaKnown RBP5.55□□□□□ -1.52
BDNF-203ENST00000395978 FKBP11Q9NYL4 201 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 NAT8Q9UHE5 227 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 ZNF705GA8MUZ8 300 aaPredicted RBP5.55□□□□□ -1.52
BDNF-203ENST00000395978 H0YL77 283 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 AP4M1O00189 453 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 OPN1MWP04001 364 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 OPN1MW2P0DN77 364 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 OPN1MW3P0DN78 364 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 RPS2P15880 293 aaKnown RBP5.55□□□□□ -1.52
BDNF-203ENST00000395978 SSTR5P35346 364 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 SRSF3P84103 164 aaKnown RBP5.55□□□□□ -1.52
BDNF-203ENST00000395978 TIGITQ495A1 244 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 RHOVQ96L33 236 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 LURAP1Q96LR2 239 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 LRFN3Q9BTN0 628 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 RPRMQ9NS64 109 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 TECTAO75443 2155 aa5.55□□□□□ -1.52
BDNF-203ENST00000395978 HEATR1Q9H583 2144 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms