RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
CXCL1-201ENST00000395761 TSPAN9O75954 239 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 CTXN2P0C2S0 81 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 HABP2Q14520 560 aaPredicted RBP13.24□□□□□ -0.29
CXCL1-201ENST00000395761 HNF4GQ14541 408 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 THNSL2Q86YJ6 484 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 TGIF2LXQ8IUE1 241 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 TMEM229BQ8NBD8 167 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 DEDD2Q8WXF8 326 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 ABHD14BQ96IU4 210 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 AGMATQ9BSE5 352 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 CABLES2Q9BTV7 478 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 BEX1Q9HBH7 125 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 RDH8Q9NYR8 311 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
CXCL1-201ENST00000395761 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 TRBV6-7A0A0A0MS04 114 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 ANKRD20A5PA0PJZ0 165 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 CLPSL1A2RUU4 121 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 ITGB1BP1O14713 200 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
CXCL1-201ENST00000395761 TBPP20226 339 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 BLCAPP62952 87 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 RNASE12Q5GAN4 147 aaKnown RBP13.23□□□□□ -0.29
CXCL1-201ENST00000395761 Q6ZS46 218 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 OR5AP2Q8NGF4 316 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 SLC25A33Q9BSK2 321 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 C16orf95Q9H693 158 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 MMP24Q9Y5R2 645 aa13.23□□□□□ -0.29
CXCL1-201ENST00000395761 OR2F2O95006 317 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 IGKV1D-33P01593 117 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 IGKV1-33P01594 117 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 CD74P04233 296 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 FCER2P06734 321 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 CSF1P09603 554 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 IL7P13232 177 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 TAS2R46P59540 309 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 TAS2R19P59542 299 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 HES1Q14469 280 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 RPL39P5Q59GN2 51 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 ZNF833PQ6ZTB9 187 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 OR10J5Q8NHC4 309 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 EDARADDQ8WWZ3 215 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 RBM14Q96PK6 669 aaKnown RBP13.22□□□□□ -0.29
CXCL1-201ENST00000395761 ZNF251Q9BRH9 671 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 MRPL20Q9BYC9 149 aaKnown RBP13.22□□□□□ -0.29
CXCL1-201ENST00000395761 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 ZNF702PQ9H963 129 aa13.22□□□□□ -0.29
CXCL1-201ENST00000395761 J3QRK9 145 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 PROP1O75360 226 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 AMY1AP04745 511 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 AMY2AP04746 511 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 AP3S2P59780 193 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 KLF9Q13886 244 aaPredicted RBP13.21□□□□□ -0.29
CXCL1-201ENST00000395761 EBI3Q14213 229 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 ACTBL2Q562R1 376 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 OR4C13Q8NGP0 309 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 EAF1Q96JC9 268 aaPredicted RBP13.21□□□□□ -0.29
CXCL1-201ENST00000395761 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 RNF114Q9Y508 228 aa13.21□□□□□ -0.29
CXCL1-201ENST00000395761 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-201ENST00000395761 RAB29O14966 203 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 TXNL1O43396 289 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 UPK1BO75841 260 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 CD3DP04234 171 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 TMEM11P17152 192 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 CD1BP29016 333 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 ARPC4P59998 168 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 DYRK1AQ13627 763 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 CDK10Q15131 360 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 STEAP1BQ6NZ63 245 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 DHRS11Q6UWP2 260 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 H1FOOQ8IZA3 346 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-201ENST00000395761 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 OR8U1Q8NH10 309 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 GINS4Q9BRT9 223 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 RANBP3Q9H6Z4 567 aaPredicted RBP13.2□□□□□ -0.3
CXCL1-201ENST00000395761 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 ANK2Q01484 3957 aa13.2□□□□□ -0.3
CXCL1-201ENST00000395761 AKAIN1P0CW23 69 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 CT45A6P0DMU7 189 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 CT45A5P0DMU8 189 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 CT45A7P0DMV0 189 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 HRH1P35367 487 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 PROK1P58294 105 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 KRTAP10-3P60369 221 aa13.19□□□□□ -0.3
CXCL1-201ENST00000395761 SRSF4Q08170 494 aaKnown RBP13.19□□□□□ -0.3
CXCL1-201ENST00000395761 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms