RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SCCPDHQ8NBX0 429 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 LHX4Q969G2 390 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 C12orf49Q9H741 205 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 MBNL3Q9NUK0 354 aaKnown RBP15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 PLA2G3Q9NZ20 509 aa15.45■□□□□ 0.06
PCDHA1-202ENST00000394633 URB1O60287 2271 aaKnown RBP15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 FAM90A26D6RGX4 464 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 CD55P08174 381 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 CD82P27701 267 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 ERVK11-1P61568 191 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 HNF4GQ14541 408 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 OR1C1Q15619 314 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 MDP1Q86V88 176 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 SNX22Q96L94 193 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 SMIM7Q9BQ49 75 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 AGMATQ9BSE5 352 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 RTL8AQ9BWD3 113 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 SLC39A9Q9NUM3 307 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 GFOD1Q9NXC2 390 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 NAT8Q9UHE5 227 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 TNFRSF9Q07011 255 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 ADIRFQ15847 76 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 ACSM6Q6P461 480 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 WIPI2Q9Y4P8 454 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 TIMM9Q9Y5J7 89 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 APC2O95996 2303 aa15.44■□□□□ 0.06
PCDHA1-202ENST00000394633 NDUFS6O75380 124 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 CLDN1O95832 211 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 MEF2BQ02080 365 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 GAMTQ14353 236 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 NCR3LG1Q68D85 454 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 CYP2G1PQ6ZSU1 146 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 C16orf82Q7Z2V1 217 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 CENPVQ7Z7K6 275 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 HMGB3O15347 200 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 NKX2-8O15522 239 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 LY86O95711 162 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 DEFA6Q01524 100 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 TLE1Q04724 770 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 DNLZQ5SXM8 178 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 MCEMP1Q8IX19 187 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 OR10A7Q8NGE5 316 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 BCL2L2Q92843 193 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 HIST1H2BLQ99880 126 aa15.43■□□□□ 0.06
PCDHA1-202ENST00000394633 GFRA3O60609 400 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 KBTBD11O94819 623 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 PFN1P07737 140 aaKnown RBP15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 PLGLB1Q02325 96 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 TMEM241Q24JQ0 296 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 SRD5A3Q9H8P0 318 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 HSPB7Q9UBY9 170 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 GTF3C1Q12789 2109 aa15.42■□□□□ 0.06
PCDHA1-202ENST00000394633 RAMP3O60896 148 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 IGF2-ASQ6U949 168 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 LINC00696Q6ZRV3 163 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 Q8IYB0 196 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 C5orf30Q96GV9 206 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 PACRGQ96M98 296 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 PYGO2Q9BRQ0 406 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 SLC25A22Q9H936 323 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 PITPNC1Q9UKF7 332 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 DOCK11Q5JSL3 2073 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 IGHV3-64DA0A0J9YX35 117 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 RNF212BA8MTL3 300 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 P0C879 139 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 RPL23P62829 140 aaKnown RBP15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 ZNF146Q15072 292 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 S100PBPQ96BU1 408 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 RPUSD4Q96CM3 377 aaKnown RBP15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 RHOVQ96L33 236 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 POLDIP2Q9Y2S7 368 aa15.41■□□□□ 0.06
PCDHA1-202ENST00000394633 CDIPTO14735 213 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 NXPH2O95156 264 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 G6PCP35575 357 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 RPL30P62888 115 aaKnown RBP15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 FAM53AQ6NSI3 398 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 NECAP1Q8NC96 275 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 OR1L1Q8NH94 360 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 GATAD1Q8WUU5 269 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 CLN8Q9UBY8 286 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 ACACAQ13085 2346 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 ANKRD11Q6UB99 2663 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 DLL1O00548 723 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 SH2D1BO14796 132 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 KRASP01116 189 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 CELA3BP08861 270 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 CEBPDP49716 269 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 BSXQ3C1V8 233 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 ZNF600Q6ZNG1 722 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 ZNF645Q8N7E2 425 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 C14orf144Q96I85 54 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 GAB2Q9UQC2 676 aa15.4■□□□□ 0.06
PCDHA1-202ENST00000394633 BSNQ9UPA5 3926 aa15.39■□□□□ 0.05
PCDHA1-202ENST00000394633 CTXND1A0A1B0GTU2 59 aa15.39■□□□□ 0.05
PCDHA1-202ENST00000394633 ODAMA1E959 279 aa15.39■□□□□ 0.05
PCDHA1-202ENST00000394633 PMS2P5A8MQ11 134 aa15.39■□□□□ 0.05
PCDHA1-202ENST00000394633 PSMB3P49720 205 aa15.39■□□□□ 0.05
PCDHA1-202ENST00000394633 ERVS71-1P61550 626 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms