RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 OR4C12Q96R67 309 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 QTRT1Q9BXR0 403 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 POLR2AP24928 1970 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 C5orf63A6NC05 138 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 H0YIG0 161 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 OR10J4P0C629 311 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 PEBP1P30086 187 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 ID3Q02535 119 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 HSD52Q0P140 79 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 EIF3IQ13347 325 aaKnown RBP10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 SPATA31B1PQ5VZV4 182 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 Q6ZNB5 142 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 RNF133Q8WVZ7 376 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 APOBEC3DQ96AK3 386 aaPredicted RBP10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 TMEM222Q9H0R3 208 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 LHFPL6Q9Y693 200 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
SLC28A1-203ENST00000394573 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 NPBWR2P48146 333 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 TM4SF4P48230 202 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 HTD2P86397 168 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 RAB30Q15771 203 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 TMEM25Q86YD3 366 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 SPIN2AQ99865 258 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 SPIN2BQ9BPZ2 258 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 FOXI3A8MTJ6 420 aaPredicted RBP10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 H0Y8G0 127 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 CDIPTO14735 213 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 PGCP20142 388 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 BHLHA15Q7RTS1 189 aaPredicted RBP10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 SLC25A40Q8TBP6 338 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 FAM131CQ96AQ9 280 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 NPFFR1Q9GZQ6 430 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 HILPDAQ9Y5L2 63 aa10.65□□□□□ -0.7
SLC28A1-203ENST00000394573 B3GALT2O43825 422 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 APOA2P02652 100 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 SCGB1A1P11684 91 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 FCGR2AP12318 317 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 PSG7Q13046 419 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 TMEM215Q68D42 235 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 C12orf54Q6X4T0 127 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 OCC1Q8TAD7 63 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.71
SLC28A1-203ENST00000394573 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 CNIH1O95406 144 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 NUDT14O95848 222 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 EOMESO95936 686 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 VDAC1P21796 283 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 TIMP3P35625 211 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 PRSS12P56730 875 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 TNXAQ16473 311 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 NRN1LQ496H8 165 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 ZNF776Q68DI1 518 aaPredicted RBP10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 MRPL54Q6P161 138 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 OR10G9Q8NGN4 311 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 OR10G7Q8NGN6 311 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 OR1F12Q8NHA8 337 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 S1PR5Q9H228 398 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 OR4C46A6NHA9 309 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 M0R2Z0 102 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 CELA3AP09093 270 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 MGST1P10620 155 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 IL11P20809 199 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 SPANXN5Q5MJ07 72 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 LSM7Q9UK45 103 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 WNT6Q9Y6F9 365 aa10.64□□□□□ -0.71
SLC28A1-203ENST00000394573 PCDH15Q96QU1 1955 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 SH2D7A6NKC9 451 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 PNMTP11086 282 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 LRRC75BQ2VPJ9 315 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 DCAF12Q5T6F0 453 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 ASPHD1Q5U4P2 390 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 RAB42Q8N4Z0 105 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 OR8B12Q8NGG6 310 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 NINJ1Q92982 152 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 STARD5Q9NSY2 213 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 COPS7AQ9UBW8 275 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 NRG2O14511 850 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 GPR75O95800 540 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 COL8A2P25067 703 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 DAP3P51398 398 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 TCTAP57738 103 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 SERF2P84101 59 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 MYBPHQ13203 477 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 C19orf35Q6ZS72 473 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 TAF15Q92804 592 aaKnown RBP eCLIP10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
SLC28A1-203ENST00000394573 HINT2Q9BX68 163 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms