RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 P2RY1P47900 373 aa12.35□□□□□ -0.43
CCT4-201ENST00000394440 MEF2CQ06413 473 aaPredicted RBP12.35□□□□□ -0.43
CCT4-201ENST00000394440 TMEM30BQ3MIR4 351 aa12.35□□□□□ -0.43
CCT4-201ENST00000394440 CXorf66Q5JRM2 361 aaPredicted RBP12.35□□□□□ -0.43
CCT4-201ENST00000394440 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
CCT4-201ENST00000394440 HSD17B10Q99714 261 aaKnown RBP12.35□□□□□ -0.43
CCT4-201ENST00000394440 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 LINC00473A8K010 186 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 KIAA1324LA8MWY0 1029 aaPredicted RBP12.34□□□□□ -0.43
CCT4-201ENST00000394440 RAMP3O60896 148 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 FSTL3O95633 263 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 NMBP08949 121 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 S100A1P23297 94 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 Q3ZCU0 254 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 BTNL3Q6UXE8 466 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 Q6ZRM9 215 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 ZNF439Q8NDP4 499 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 C19orf12Q9NSK7 152 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 TAS2R3Q9NYW6 316 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 DOCK11Q5JSL3 2073 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 CLDN1O95832 211 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 NDUFB7P17568 137 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCT4-201ENST00000394440 ZNF273Q14593 569 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 HFEQ30201 348 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
CCT4-201ENST00000394440 C17orf98A8MV24 154 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 TAAR5O14804 337 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 SLC31A2O15432 143 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 P0C879 139 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 LPAR6P43657 344 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 GPR12P47775 334 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 RAB14P61106 215 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 NDUFA2O43678 99 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 MMP23AO75900 390 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
CCT4-201ENST00000394440 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
CCT4-201ENST00000394440 AKR1C2P52895 323 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 CT45A1Q5HYN5 189 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 SPAG16Q8N0X2 631 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 CT45A3Q8NHU0 189 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
CCT4-201ENST00000394440 RPUSD1Q9UJJ7 312 aaKnown RBP12.33□□□□□ -0.44
CCT4-201ENST00000394440 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 GPR137BO60478 399 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 EPHA1P21709 976 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 COL8A2P25067 703 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 RAB7AP51149 207 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
CCT4-201ENST00000394440 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 BAP18Q8IXM2 172 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 NDUFB3O43676 98 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 DANCRP0C864 163 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 MMP9P14780 707 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 IGFBP2P18065 325 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 TMEM33P57088 247 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 LINC00205P59089 165 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 DTX2Q86UW9 622 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 CACNG5Q9UF02 275 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
CCT4-201ENST00000394440 LYNX1G3V0Z9 82 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 DVL1O14640 695 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 S1PR2O95136 353 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 TMEM50AO95807 157 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 GAPDHP04406 335 aaKnown RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 LYNX1P0DP58 116 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 OR2B11Q5JQS5 317 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 NCR3LG1Q68D85 454 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 C1orf229Q6ZS94 237 aaPredicted RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 RNASE11Q8TAA1 199 aaKnown RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 SSSCA1O60232 199 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 IGHV2-70P01814 119 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 SOD3P08294 240 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 ZNF816Q0VGE8 651 aaPredicted RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 RPL39P5Q59GN2 51 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 PRAMEF5Q5TYX0 476 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 TMEM200BQ69YZ2 307 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 ZNF295-AS1Q8N0V1 137 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 BSCL2Q96G97 398 aaPredicted RBP12.31□□□□□ -0.44
CCT4-201ENST00000394440 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
CCT4-201ENST00000394440 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms