RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 RBM14Q96PK6 669 aaKnown RBP8.91□□□□□ -0.98
ACTN1-203ENST00000394419 TMEM204Q9BSN7 226 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 H7BYZ3 331 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 PSPNO60542 156 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 ZG16O60844 167 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 CRYAAP02489 173 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 COX5BP10606 129 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 MPV17P39210 176 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 GLIPR1P48060 266 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 DAZAP2Q15038 168 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-203ENST00000394419 RNFT1Q5M7Z0 435 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 PRAMEF5Q5TYX0 476 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 SPNS3Q6ZMD2 512 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 OR10G4Q8NGN3 311 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 OR10G9Q8NGN4 311 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 OR10G7Q8NGN6 311 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 MUCL1Q96DR8 90 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
ACTN1-203ENST00000394419 METTL1Q9UBP6 276 aaKnown RBP8.91□□□□□ -0.98
ACTN1-203ENST00000394419 PIGBOS1A0A0B4J2F0 54 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 UBE2CO00762 179 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 HEPN1Q6WQI6 88 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 KLF14Q8TD94 323 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-203ENST00000394419 TMEM37Q8WXS4 190 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 TAF15Q92804 592 aaKnown RBP eCLIP8.9□□□□□ -0.98
ACTN1-203ENST00000394419 BCL2L2Q92843 193 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ABCA4P78363 2273 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 C21orf140B9A014 251 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 IGKV1-39P01597 117 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 IGKV1D-39P04432 117 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 PGA5P0DJD9 388 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 CHRNA7P36544 502 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ELOBQ15370 118 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF506Q5JVG8 444 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 Q8IYB0 196 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 VKORC1L1Q8N0U8 176 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF525Q8N782 197 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 DTD1Q8TEA8 209 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-203ENST00000394419 SPRR3Q9UBC9 169 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ARFGEF3Q5TH69 2177 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 ZNF318Q5VUA4 2279 aa8.9□□□□□ -0.98
ACTN1-203ENST00000394419 MED13LQ71F56 2210 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 IGHV3OR15-7A0A075B7D8 119 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 C12orf77C9JDV5 145 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 FOLR2P14207 255 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 HOXA6P31267 233 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 SRSF6Q13247 344 aaKnown RBP8.9□□□□□ -0.99
ACTN1-203ENST00000394419 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.99
ACTN1-203ENST00000394419 GATAD1Q8WUU5 269 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 TUBA4BQ9H853 241 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 MRPS18CQ9Y3D5 142 aaKnown RBP8.9□□□□□ -0.99
ACTN1-203ENST00000394419 RNF115Q9Y4L5 304 aa8.9□□□□□ -0.99
ACTN1-203ENST00000394419 SPTAN1Q13813 2472 aaKnown RBP8.9□□□□□ -0.99
ACTN1-203ENST00000394419 TMEM265A0A087WTH1 108 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 C17orf98A8MV24 154 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SPINT2O43291 252 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 PAGE4O60829 102 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SMPD2O60906 423 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 OPN1MWP04001 364 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 OPN1MW2P0DN77 364 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 OPN1MW3P0DN78 364 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 GPR12P47775 334 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 RTP5Q14D33 572 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 NRN1LQ496H8 165 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 MOB1BQ7L9L4 216 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 LEAP2Q969E1 77 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 GGACTQ9BVM4 153 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 DDA1Q9BW61 102 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 PATZ1Q9HBE1 687 aaKnown RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 VAX2Q9UIW0 290 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 KLF2Q9Y5W3 355 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SPTBN1Q01082 2364 aaKnown RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 M0R1X1 148 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 TRGC1P0CF51 173 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 BTF3P20290 206 aaKnown RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 TNFRSF9Q07011 255 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 TMEM241Q24JQ0 296 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 WDR86Q86TI4 376 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF383Q8NA42 475 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 OR4A16Q8NH70 328 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 LRRC29Q8WV35 223 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SSX3Q99909 188 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SCRT1Q9BWW7 348 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 PKIBQ9C010 78 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 A0A1W2PNU3 283 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 PPP5D1E7EU14 171 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 IGHV1-2P23083 117 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF83P51522 516 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 RPL30P62888 115 aaKnown RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 COL10A1Q03692 680 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 VWA1Q6PCB0 445 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 IL22RA2Q969J5 263 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
ACTN1-203ENST00000394419 SMDT1Q9H4I9 107 aa8.89□□□□□ -0.99
ACTN1-203ENST00000394419 ODAMA1E959 279 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 SPRY3O43610 288 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 SLC25A6P12236 298 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms