RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GATA4P43694 442 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 ARL16Q0P5N6 197 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 SWI5Q1ZZU3 235 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 MORN2Q502X0 79 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 NCR3LG1Q68D85 454 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 RND1Q92730 232 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
GPC3-202ENST00000394299 CACFD1Q9UGQ2 172 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 LRBAP50851 2863 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 DYSFO75923 2080 aa12.51□□□□□ -0.41
GPC3-202ENST00000394299 SLC31A2O15432 143 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 PRH1P02810 166 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 GZMHP20718 246 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 LOXL3P58215 753 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 PARP11Q9NR21 331 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 TSPAN9O75954 239 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 BLOC1S1P78537 153 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 MIDNQ504T8 468 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
GPC3-202ENST00000394299 SLC25A6P12236 298 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 PLA2G5P39877 138 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 CAMLGP49069 296 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
GPC3-202ENST00000394299 HTD2P86397 168 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 OR2G3Q8NGZ4 309 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 FAM222BQ8WU58 562 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 GAFA1Q96PS6 74 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 UQCC1Q9NVA1 299 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 PSENENQ9NZ42 101 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 RNF212BA8MTL3 300 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 F8W036 122 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 CLDN14O95500 239 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
GPC3-202ENST00000394299 PAX5Q02548 391 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 STUMQ69YW2 141 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 ZBTB34Q8NCN2 500 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 PPP1R35Q8TAP8 253 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
GPC3-202ENST00000394299 RNASEK-C17orf49H0YIS7 233 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 ADH4P08319 380 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
GPC3-202ENST00000394299 SPANXN5Q5MJ07 72 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 AIFM2Q9BRQ8 373 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 COL6A6A6NMZ7 2263 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
GPC3-202ENST00000394299 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 TSPAN4O14817 238 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 MMP23AO75900 390 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 ATG12O94817 140 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 CGB3P0DN86 165 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 CGB7P0DN87 165 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 MMP9P14780 707 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 TNFSF4P23510 183 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 GPR12P47775 334 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 F2RL1P55085 397 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 HNF4GQ14541 408 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 ZNF266Q14584 549 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 PUSL1Q8N0Z8 303 aaKnown RBP12.48□□□□□ -0.41
GPC3-202ENST00000394299 LINC01560Q8TB33 94 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 RAB40CQ96S21 281 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 TSNAXQ99598 290 aaKnown RBP12.48□□□□□ -0.41
GPC3-202ENST00000394299 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
GPC3-202ENST00000394299 FAM74A7A6NL05 159 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 TSPAN15O95858 294 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 NFYBP25208 207 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 UBE2KP61086 200 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 RBPJQ06330 500 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 CATR1Q13166 79 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 CDSNQ15517 529 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 SSX9Q7RTT3 188 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 VKORC1L1Q8N0U8 176 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 LYPD6BQ8NI32 183 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 C14orf79Q96F83 325 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 RBKSQ9H477 322 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 TMPRSS2O15393 492 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 FCGR3BO75015 233 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 PLAUP00749 431 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 P0C879 139 aa12.47□□□□□ -0.41
GPC3-202ENST00000394299 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
GPC3-202ENST00000394299 SULT1A1P50225 295 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms