RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 CBLN2Q8IUK8 224 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 BOD1L2Q8IYS8 172 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 HS3ST5Q8IZT8 346 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 JAGN1Q8N5M9 183 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 NPWQ8N729 165 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR4K5Q8NGD3 323 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR10AD1Q8NGE0 317 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR52E2Q8NGJ4 325 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR6K3Q8NGY3 331 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR52E5Q8NH55 327 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR5W2Q8NH69 310 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 OR4C6Q8NH72 309 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TERB2Q8NHR7 220 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MCFD2Q8NI22 146 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 APH1BQ8WW43 257 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ACOT12Q8WYK0 555 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 HIST1H2BAQ96A08 127 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM159Q96B96 161 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ROPN1LQ96C74 230 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 GPR146Q96CH1 333 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TEX37Q96LM6 180 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TSNAXQ99598 290 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 HOPXQ9BPY8 73 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 C20orf144Q9BQM9 153 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 THTPAQ9BU02 230 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 LYRM4Q9HD34 91 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 C6orf50Q9HD87 102 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 C14orf105Q9NVL8 296 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MRPL22Q9NWU5 206 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF222Q9UK12 451 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 FBXL3Q9UKT7 428 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ANGPT4Q9Y264 503 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 WDR90Q96KV7 1748 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 RGPD3A6NKT7 1758 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 MAST2Q6P0Q8 1798 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 RGPD4Q7Z3J3 1758 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 PTPRJQ12913 1337 aa1.9□□□□□ -2.11
PTPRC-205ENST00000391970 TNRC6CQ9HCJ0 1690 aaKnown RBP1.9□□□□□ -2.11
PTPRC-205ENST00000391970 ALPK3Q96L96 1907 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SCN9AQ15858 1988 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 IGHV2OR16-5A0A0B4J2B6 119 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM72A0PK05 275 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 A6NDN8 102 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR5H1A6NKK0 313 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF99A8MXY4 864 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 F6UZH7 168 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 M0R3G1 203 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 UBFD1O14562 309 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MAGEB4O15481 346 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 FGF16O43320 207 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MFSD11O43934 449 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SLC19A2O60779 497 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF324O75467 553 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR2A4O95047 310 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 RCBTB2O95199 551 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 LSM8O95777 96 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CFDP00746 253 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 GCGP01275 180 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 IFNA1P01562 189 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 HLA-HP01893 362 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 HBE1P02100 147 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 PRB2P02812 416 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MT-ND4P03905 459 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 IGKV3-11P04433 115 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SERPINE1P05121 402 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 BPGMP07738 259 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ERGP11308 486 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 GZMHP20718 246 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TNFSF9P41273 254 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MAGEA12P43365 314 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CRYBA4P53673 196 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 VSX2P58304 361 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 UBE2NP61088 152 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MAXP61244 160 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 PPP1CBP62140 327 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 RANP62826 216 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 HOXC5Q00444 222 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 FABP5Q01469 135 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SYCNQ0VAF6 134 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SRSF6Q13247 344 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SKP2Q13309 424 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF345Q14585 488 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 PEA15Q15121 130 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SURF2Q15527 256 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 LGALSLQ3ZCW2 172 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OCIAD2Q56VL3 154 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SPIN3Q5JUX0 258 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TPTE2P1Q5T6R2 138 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM244Q5VVB8 128 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TRIQKQ629K1 86 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SAXO2Q658L1 398 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 STUMQ69YW2 141 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 EIF5AL1Q6IS14 154 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 LCN8Q6JVE9 175 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 FAM45BPQ6NSW5 357 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 DRAM2Q6UX65 266 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TOMM20LQ6UXN7 152 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SSX7Q7RTT5 188 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms