RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 HBEGFQ99075 208 aa0.55□□□□□ -2.32
SNORA40.3-201ENST00000390964 NKX6-2Q9C056 277 aaPredicted RBP0.55□□□□□ -2.32
SNORA40.3-201ENST00000390964 UBQLN4Q9NRR5 601 aa0.55□□□□□ -2.32
SNORA40.3-201ENST00000390964 NRBP2Q9NSY0 501 aa0.55□□□□□ -2.32
SNORA40.3-201ENST00000390964 CHD2O14647 1828 aaKnown RBP0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 PTPRBP23467 1997 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 PCDH15Q96QU1 1955 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 BHLHE40O14503 412 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 ZNF737O75373 536 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 PGLYRP1O75594 196 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 CST4P01036 141 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 CRYBA1P05813 215 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 NQO2P16083 231 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 OR2D3Q8NGH3 330 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 CLDND2Q8NHS1 167 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 LRRC39Q96DD0 335 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 GNB1LQ9BYB4 327 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 MED9Q9NWA0 146 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 SNX10Q9Y5X0 201 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 KIAA0232Q92628 1395 aa0.54□□□□□ -2.32
SNORA40.3-201ENST00000390964 FREM1Q5H8C1 2179 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 NDUFB2O95178 105 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 LDOC1O95751 146 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 BPGMP07738 259 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 OR13C7P0DN81 318 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 STC1P52823 247 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 TAS2R30P59541 319 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 HOXC5Q00444 222 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 TMEM155Q4W5P6 130 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 LRRC20Q8TCA0 184 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 SMCR5Q8TEV8 140 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 TNFAIP8L1Q8WVP5 186 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 ACY3Q96HD9 319 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 MS4A12Q9NXJ0 267 aa0.53□□□□□ -2.32
SNORA40.3-201ENST00000390964 INTS1Q8N201 2190 aaKnown RBP0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 IGKV2D-26A0A0A0MRZ7 120 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 UBE2L6O14933 153 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 SGCEO43556 437 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 NPYP01303 97 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 HSPA9P38646 679 aaKnown RBP0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 DAPP51397 102 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 XIAPP98170 497 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 RAB31Q13636 194 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 EXOC3L4Q17RC7 722 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 TMEM249Q2WGJ8 235 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 NAA40Q86UY6 237 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 CYGBQ8WWM9 190 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 RORBQ92753 470 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 PPWD1Q96BP3 646 aaKnown RBP0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 PRRG3Q9BZD7 231 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 VCX3BQ9H321 246 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 OR51B6Q9H340 312 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 GLS2Q9UI32 602 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 MYOFQ9NZM1 2061 aa0.52□□□□□ -2.33
SNORA40.3-201ENST00000390964 LIMS3P0CW19 117 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 LIMS4P0CW20 117 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 NUP153P49790 1475 aaKnown RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 RBM11P57052 281 aaKnown RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 TNNC1P63316 161 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 C1DQ13901 141 aaKnown RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 DEFB115Q30KQ5 88 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 TMEM31Q5JXX7 168 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 DRAM2Q6UX65 266 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 FP248Q71RG6 208 aaPredicted RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 NATD1Q8N6N6 113 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 RPS4Y2Q8TD47 263 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 DOHHQ9BU89 302 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 EIF5A2Q9GZV4 153 aaKnown RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 SLC2A9Q9NRM0 540 aa0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 MRM2Q9UI43 246 aaKnown RBP0.51□□□□□ -2.33
SNORA40.3-201ENST00000390964 DIDO1Q9BTC0 2240 aaKnown RBP0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 REREQ9P2R6 1566 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 GRIN2BQ13224 1484 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 CRPP02741 224 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 CCL2P13500 99 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 AGTR1P30556 359 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 OR10J1P30954 320 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 CA7P43166 264 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 CARD18P57730 90 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 SCGB1D4Q6XE38 83 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 SLC13A5Q86YT5 568 aaPredicted RBP0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 SLC7A6Q92536 515 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 CCDC127Q96BQ5 260 aa0.5□□□□□ -2.33
SNORA40.3-201ENST00000390964 NPATQ14207 1427 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 F5H5K5 113 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 LIN7AO14910 233 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 GSTZ1O43708 216 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 CIAO1O76071 339 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 FADS2O95864 444 aaKnown RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 SERPINA7P05543 415 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 NUP62P37198 522 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 IFNGR2P38484 337 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 SLC36A2Q495M3 483 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 LYZL1Q6UWQ5 148 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 KTN1-AS1Q86SY8 53 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 RPS19BP1Q86WX3 136 aaKnown RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 CCDC12Q8WUD4 166 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 MBD3L1Q8WWY6 194 aa0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 CPNE2Q96FN4 548 aaPredicted RBP0.49□□□□□ -2.33
SNORA40.3-201ENST00000390964 MSANTD3Q96H12 275 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms