RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ST6GALNAC3Q8NDV1 305 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 BPIFCQ8NFQ6 507 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 OR5C1Q8NGR4 320 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 YPEL2Q96QA6 119 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 CCL13Q99616 98 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 HRH4Q9H3N8 390 aa15.1■□□□□ 0.01
ACTN4-202ENST00000390009 FAM212BQ9NTI7 297 aaPredicted RBP15.1■□□□□ 0.01
ACTN4-202ENST00000390009 SMG1Q96Q15 3661 aaKnown RBP15.09■□□□□ 0.01
ACTN4-202ENST00000390009 LINC00473A8K010 186 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 VSTM5A8MXK1 200 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 NUDT19A8MXV4 375 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 SHISA9B4DS77 424 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 CGB3P0DN86 165 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 CGB7P0DN87 165 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 BLOC1S1P78537 153 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 NCMAPQ5T1S8 102 aa15.09■□□□□ 0.01
ACTN4-202ENST00000390009 HSD17B10Q99714 261 aaKnown RBP15.09■□□□□ 0.01
ACTN4-202ENST00000390009 SYNGR2O43760 224 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 S1PR2O95136 353 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 KRASP01116 189 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 G6PCP35575 357 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 GPR12P47775 334 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 DYNLT3P51808 116 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 RPL23AP62750 156 aaKnown RBP15.08■□□□□ 0.01
ACTN4-202ENST00000390009 DMRTC2Q8IXT2 367 aaPredicted RBP15.08■□□□□ 0.01
ACTN4-202ENST00000390009 TMEM217Q8N7C4 229 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 FAM216BQ8N7L0 139 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 TCTEX1D1Q8N7M0 179 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 FAM234AQ9H0X4 552 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 SH3BGRL3Q9H299 93 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 PARP11Q9NR21 331 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 WSB1Q9Y6I7 421 aa15.08■□□□□ 0.01
ACTN4-202ENST00000390009 PKDREJQ9NTG1 2253 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 LRRC30A6NM36 301 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 H3BP45 60 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 LINC00205P59089 165 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 SWI5Q1ZZU3 235 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 C17orf58Q2M2W7 97 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 IL34Q6ZMJ4 242 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 Q6ZRG5 221 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 KDF1Q8NAX2 398 aaPredicted RBP15.08■□□□□ 0
ACTN4-202ENST00000390009 FAM216AQ8WUB2 273 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 NARS2Q96I59 477 aaKnown RBP15.08■□□□□ 0
ACTN4-202ENST00000390009 SAP30LQ9HAJ7 183 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 COA4Q9NYJ1 87 aa15.08■□□□□ 0
ACTN4-202ENST00000390009 E7EQL1 145 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 CCL21O00585 134 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 TXNL1O43396 289 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 PJVKQ0ZLH3 352 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 EGLN1Q9GZT9 426 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 ZZEF1O43149 2961 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 TRGV10A0A0A0MS01 117 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 FAM90A27PA6NNH2 459 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 SIGLEC5O15389 551 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 NUPL2O15504 423 aaKnown RBP15.07■□□□□ 0
ACTN4-202ENST00000390009 PROP1O75360 226 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 ATG12O94817 140 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 IGHV3-7P01780 117 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 DANCRP0C864 163 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 P0C879 139 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 IAPPP10997 89 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 ZNF134P52741 427 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 AKR1C1Q04828 323 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 STX12Q86Y82 276 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 NEUROG1Q92886 237 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 RAB9BQ9NP90 201 aa15.07■□□□□ 0
ACTN4-202ENST00000390009 KBTBD11-OT1A0A1B0GTJ5 212 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 CLDN14O95500 239 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 C1QTNF9P0C862 333 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 CHRNB4P30926 498 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 BTNL8Q6UX41 500 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 TCF23Q7RTU1 214 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 RNASE6Q93091 150 aaKnown RBP15.06■□□□□ 0
ACTN4-202ENST00000390009 KCNJ16Q9NPI9 418 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 CLN8Q9UBY8 286 aa15.06■□□□□ 0
ACTN4-202ENST00000390009 YLPM1P49750 1951 aaKnown RBP15.06■□□□□ 0
ACTN4-202ENST00000390009 HCFC1P51610 2035 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 FAM90A26D6RGX4 464 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 DUTP33316 252 aaKnown RBP15.05■□□□□ 0
ACTN4-202ENST00000390009 SULT1A1P50225 295 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 F2RL1P55085 397 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 SRSF3P84103 164 aaKnown RBP15.05■□□□□ 0
ACTN4-202ENST00000390009 FBXL19-AS1Q494R0 122 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 IFI27L2Q9H2X8 130 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 ARFGEF3Q5TH69 2177 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 ATRXP46100 2492 aa15.05■□□□□ 0
ACTN4-202ENST00000390009 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.05■□□□□ -0
ACTN4-202ENST00000390009 TMPRSS2O15393 492 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 APOC3P02656 99 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 ID4P47928 161 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 TMEM267Q0VDI3 215 aaPredicted RBP15.05■□□□□ -0
ACTN4-202ENST00000390009 NCR3LG1Q68D85 454 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 GFOD1Q9NXC2 390 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 PSENENQ9NZ42 101 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 LAMP3Q9UQV4 416 aa15.05■□□□□ -0
ACTN4-202ENST00000390009 TRAV38-1A0A0B4J264 116 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 NKX6-3A6NJ46 265 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 NDUFA2O43678 99 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 CD3EP07766 207 aa15.04■□□□□ -0
ACTN4-202ENST00000390009 ATP6V0CP27449 155 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms