RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 APCDD1LQ8NCL9 501 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 RPL36A-HNRNPH2H7BZ11 118 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 HPRT1P00492 218 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 C14orf144Q96I85 54 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 CHRNA10Q9GZZ6 450 aa10.84□□□□□ -0.67
SRGAP3-202ENST00000383836 CD8AP01732 235 aa10.83□□□□□ -0.67
SRGAP3-202ENST00000383836 PAPPA2Q9BXP8 1791 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 RPS11P62280 158 aaKnown RBP eCLIP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 OR2A4O95047 310 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 IGHV3-13P01766 116 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 IGHV3-7P01780 117 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 OR2A7Q96R45 310 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 TINAGQ9UJW2 476 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 A0A087WWC5 75 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 MT-CO3P00414 261 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 HOXA5P20719 270 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 MRPS11P82912 194 aaKnown RBP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 TMEM252Q8N6L7 170 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 MAS1LP35410 378 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 WNT10AQ9GZT5 417 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 C6orf106Q9H6K1 298 aaPredicted RBP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 TMSB15BA0A087X1C1 80 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 NFAM1Q8NET5 270 aaPredicted RBP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 RAXQ9Y2V3 346 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 TBL2Q9Y4P3 447 aaKnown RBP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 UBE2CO00762 179 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 ATG4DQ86TL0 474 aaPredicted RBP10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 FZR1Q9UM11 496 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 OR51B2Q9Y5P1 312 aa10.83□□□□□ -0.68
SRGAP3-202ENST00000383836 A0A1B0GWB2 263 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 ZNF205O95201 554 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 ZNF735P0CB33 412 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 PNLIPP16233 465 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 GFERP55789 205 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 GAB4Q2WGN9 574 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 HIGD1AQ9Y241 93 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 SYNGR1O43759 233 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 FSTP19883 344 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 NANOS3P60323 173 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 DPH3Q96FX2 82 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 LGALS7P47929 136 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 FAM222BQ8WU58 562 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 NUDT16L1Q9BRJ7 211 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 SMOC1Q9H4F8 434 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 C7orf71A4D174 169 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 FCGR3AP08637 254 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 SMAD4Q13485 552 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 FAM181AQ8N9Y4 354 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 Q8WTZ3 238 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 ELSPBP1Q96BH3 223 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 KCNS1Q96KK3 526 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 WNT16Q9UBV4 365 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 AQP3Q92482 292 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 HDHD3Q9BSH5 251 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 TMEM208Q9BTX3 173 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 FNDC1Q4ZHG4 1894 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 GCM2O75603 506 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 GZMMP51124 257 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 C10orf111Q8N326 155 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 SIGMAR1Q99720 223 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 GPR3P46089 330 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 LCN2P80188 198 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 SOSTQ9BQB4 213 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
SRGAP3-202ENST00000383836 MEX3AA1L020 520 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 VENTXO95231 258 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 CCL2P13500 99 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 NEUROG1Q92886 237 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 FLRT3Q9NZU0 649 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 KIAA1549LQ6ZVL6 1849 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 A0A1W2PPC1 479 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 SPCS1Q9Y6A9 102 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 P2RY4P51582 365 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 LILRA5A6NI73 299 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 SHISA7A6NL88 538 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 J3QR06 171 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 CA11O75493 328 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 CBLN1P23435 193 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 PPP1CCP36873 323 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 Q5BKY6 102 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 OR1L8Q8NGR8 309 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 TM4SF19Q96DZ7 209 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 SIRT4Q9Y6E7 314 aaPredicted RBP10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 EML2O95834 649 aa10.81□□□□□ -0.68
SRGAP3-202ENST00000383836 MGAT2Q10469 447 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms